Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq125 625 4e-174 seq3947 194 2e-44 >seq125 Length=45052 Score = 625 bits (692), Expect = 4e-174 Identities = 1391/2066 (67%), Gaps = 51/2066 (2%) Strand=Plus/Minus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || |||||||| || | ||||| | | |||||||| |||||||| || ||||| | Sbjct 28782 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCAGTTTTTAAG 28723 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 |||| ||||||| |||||||||||||||| |||| | |||| || | Sbjct 28722 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 28663 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTT---TT 68550 ||||||||||| || || ||||| || || || || | ||| || ||||| | || Sbjct 28662 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 28603 Query 68551 ATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGA 68610 || | | || | ||| || ||||||| || || | | ||| || || ||||| Sbjct 28602 ATGGTGCGCTGT-GAG--ATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGA 28546 Query 68611 AGGCTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCA 68667 | | | |||| ||||| || || ||||| ||||| || ||| || || | |||| Sbjct 28545 ATATTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCA 28486 Query 68668 TTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCC 68727 ||| || | || | | || | || | ||||| || |||||||| || Sbjct 28485 GACCATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCT 28426 Query 68728 CCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTT 68787 || | ||| || | || | ||| |||||| ||||||||| || | | | |||||| | Sbjct 28425 CCTGCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAAT 28366 Query 68788 CCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGA 68847 || ||||||||| || ||| |||||||| || || || | ||| ||||| | ||| Sbjct 28365 CCAAGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGG 28306 Query 68848 CCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACA 68907 |||| | | |||| | | |||| | | ||||||||| | || | ||| ||| Sbjct 28305 CCATAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACG 28246 Query 68908 TTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAA 68967 ||| | ||||||||| || || | || || || | || || || || Sbjct 28245 CCCCACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTAT 28186 Query 68968 GGTCCTTCCTGTTCAGCTAGTTCACAACTT--GCCTCTAATGCACCGTAATAAATTGTTT 69025 | ||| | || |||| ||| ||| | || || | | ||| || |||| Sbjct 28185 GTACCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTT 28128 Query 69026 CGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAA 69085 | || |||| || ||||||| || ||| ||| || |||||||| | | ||| | Sbjct 28127 CAAAGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCA 28068 Query 69086 TAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAAC 69145 ||| ||||||| | || ||||| || | | | || |||| || | | | ||| | Sbjct 28067 AAAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCG-TAAATTGCTC 28009 Query 69146 TTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACT 69204 || | |||||| || | |||||| ||||||| ||| || |||||||| ||||| | ||| Sbjct 28008 TTACGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACT 27949 Query 69205 ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATC-----TAT-AACA 69258 || || | | || || | |||||| |||||||||| ||| ||| |||| Sbjct 27948 ACAACCTGACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACA 27889 Query 69259 AACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATAT 69318 | | || |||| ||||| | ||||||||| || || |||| | | || ||| Sbjct 27888 TAGGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTAT 27829 Query 69319 TGTATTATCTCTGTACATAGATTA---CTACATTTGATAGTCCCCAGATTTTGCTGATTA 69375 | | || || ||||| |||||| |||| ||||||||| ||||||| ||||| Sbjct 27828 TCAACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTG 27772 Query 69376 CTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 69435 |||||||| ||||| || || ||||| || ||||| || ||||||||||| | || | | Sbjct 27771 CTCTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCT 27712 Query 69436 TCGATAATAGATTTCCAAACGA------CCCTAGCATTTATTACGGTCTTGTAACGCTTC 69489 ||||| || || | ||| | || || | || | |||| ||| | |||| Sbjct 27711 TCGATTATTGAGTACCATAGCTTTTGTGCCATAATAGTTCT-ACGGCCTTT---CCCTTC 27656 Query 69490 TCTTTTTCATATTGTGTATATA--GCCGTTCGAATTCATCTCCCCAAACATCATCCAATC 69547 | | |||||| | | ||||| ||| || |||||||| || | |||||| | | | Sbjct 27655 T--TGTTCATACTTTTCATATAAAGCC--TCAAATTCATCGCCATACACATCAGCTAGAC 27600 Query 69548 CAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAA 69607 ||||||||||| || ||||||| | ||| || ||| | | ||||| ||||||| Sbjct 27599 CAGGACATTCACAAGGGCACATCAGAGTCCATTCACCATTTTTTTCAACTCTCTTCATAA 27540 Query 69608 ATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCT 69666 | ||||| || |||||||| || ||| || ||||| | | | | |||||| || || Sbjct 27539 AGAGATCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCG 27481 Query 69667 GTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 69726 |||||| || ||||| ||||| | ||||| | |||||||| || | |||||| Sbjct 27480 TGATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATA 27421 Query 69727 GCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAG 69786 || | ||||||| || ||||| || || ||||| | ||||||||||| ||||| || Sbjct 27420 GCGAATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAG 27361 Query 69787 ACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCT 69846 |||| |||||||| | ||||||||| || || ||||||||||| | |||||| ||| Sbjct 27360 ACTCGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCT 27301 Query 69847 CTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 69906 | |||||||| | |||| || || || || || || ||||||| || | ||| Sbjct 27300 GTCGCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCG 27241 Query 69907 CAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAA 69966 ||| |||||| || || || || || || || ||||| ||| |||| | || | ||| Sbjct 27240 CAAGTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAG 27181 Query 69967 CAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTG 70026 || ||| | |||| ||| ||| || || ||||| ||||| || || || || Sbjct 27180 CATGAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTA 27121 Query 70027 AACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGA 70086 || |||| | || | ||||| || || || ||||| ||||| || || || ||| Sbjct 27120 AAGTATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGA 27061 Query 70087 ATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATT 70146 ||||| | ||||||||||| | |||||| || || || || || |||||| ||| | Sbjct 27060 ATTCCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGAGG 27001 Query 70147 TTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTT 70206 | || |||||| |||||||||| || || |||||||| | ||| |||||||| Sbjct 27000 CGAAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGA 26941 Query 70207 TCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATC---CATAACA 70263 || |||| || | ||||| || | | | | || || |||| | || ||| | | Sbjct 26940 TCATAAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACAT-AGA 26882 Query 70264 GTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCT 70323 | | | ||| || |||||| ||| |||||||| ||||| ||||| | | | | ||| Sbjct 26881 TTTGCT--GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCA 26824 Query 70324 TCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTG 70383 | ||| | | ||| ||||||||||| ||||||| ||| || | ||||| | Sbjct 26823 GAGACTACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGT 26764 Query 70384 GCTGCTAGAATAGCATAGTCAGGATG 70409 ||||| |||||||| ||||| ||||| Sbjct 26763 GCTGCAAGAATAGCGTAGTCGGGATG 26738 >seq3947 Length=15482 Score = 194 bits (214), Expect = 2e-44 Identities = 589/921 (64%), Gaps = 72/921 (8%) Strand=Plus/Minus Query 39310 TGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCC 39369 || ||| ||||| ||||| || ||||| || ||||| |||||||| ||||| || || Sbjct 9263 TGCCATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCC 9204 Query 39370 TTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAA 39429 |||| || |||||||||||||||||||| ||||| | | || ||| ||| | Sbjct 9203 AGCCAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATT 9144 Query 39430 TCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACA 39489 |||||| | | || ||||||||| ||||| ||||| ||||||| Sbjct 9143 TCCTAACGAGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGC 9084 Query 39490 ATTCATTCCTATGAGTTTAAC---TGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTC 39546 ||||| || |||| | | ||| || || || |||||||| |||| ||| || || Sbjct 9083 GTTCATGCC---GAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTC 9027 Query 39547 TACGGCCTCTGTTATTATCGATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGT 39604 ||||| | ||| || | || | || || | | ||| ||| |||||| Sbjct 9026 GACGGCTTGTGTGATAAC--ATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGT 8969 Query 39605 TTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTA 39664 ||| | | || || ||||| |||||||| || || | ||| | ||||||| Sbjct 8968 GAAAAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTA 8909 Query 39665 GAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT 39724 ||||| || || |||| ||| | || || || || | |||||| |||| |||||| || Sbjct 8908 GAAAAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAA 8849 Query 39725 CCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTA 39784 ||| || || || || || ||||| ||||| || ||||| | | ||| | | | Sbjct 8848 CCACTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGAC 8789 Query 39785 TCATTATGT---ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCA----- 39836 || || | | ||||| ||||| |||| || ||||| | |||||| | Sbjct 8788 TCTTTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATG 8729 Query 39837 -------------------------------------------TTGTTTCTATAGCATTA 39853 |||| || |||||||| Sbjct 8728 AATCGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTG 8669 Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913 || |||||| ||||| | | |||||| | || ||||| ||||| || ||| || Sbjct 8668 AAAAGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTT 8609 Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 || || ||||| ||||| ||| || |||||||| ||||| |||| || |||| ||| Sbjct 8608 TCAGAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATC 8549 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || || || | ||| | || | | |||||||| || || || || |||||| Sbjct 8548 TGCACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCA 8489 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTATT 40086 ||||| || | ||||| ||||| ||| |||||| ||| | ||||| Sbjct 8488 AAAAAGGCTAGCACATGAGATATAAAGTATCGTTCATC----ATCATTGAGACGGTTATT 8433 Query 40087 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGC 40146 ||| || | |||||||| || | ||| | || ||||| |||||||| || ||||| || Sbjct 8432 CCAATCGTGAATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGC 8373 Query 40147 CTTTTTGTACATGTTCCATAT 40167 ||||||||||| | |||||| Sbjct 8372 TTTTTTGTACATATGCCATAT 8352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686855358495360