Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq125 140 4e-28 >seq125 Length=45052 Score = 140 bits (154), Expect = 4e-28 Identities = 414/629 (66%), Gaps = 21/629 (3%) Strand=Plus/Plus Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || |||||||| | ||| |||||||| | || ||||| || || || || || || Sbjct 27317 GGAACAAATGGAAACTCAAATGGTATTGTACCGATGCTCCGAGTCTTCAATAATACTGCC 27376 Query 104573 CGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAG 104626 | ||||| |||||| ||| ||||| |||| | |||| | ||| | ||| Sbjct 27377 AGATATGTTGATCAAGGTGGTAATAAGCGTCC---GGGAGCATTCGCTATATATTTGGAG 27433 Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG 104686 ||||||||||| ||||| | |||||||| || | || || || || | || || Sbjct 27434 CCATGGCACGCCGATATATTTGAGTTCCTCGACCTCCGCAAAAATCACGGCAAAGAAGAA 27493 Query 104687 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 104745 | || ||| || ||||| |||| || || ||||| || |||||||| ||||||||||| Sbjct 27494 GTTCG-TGCACGTGATCTATTCTATGCCCTTTGGATACCTGATCTCTTTATGAAGAGAGT 27552 Query 104746 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCTGGTCTCTCCGATG 104804 ||| | | ||| | ||| |||| | || || | || | |||||||| | |||| Sbjct 27553 TGAAAAAAATGGTGAATGGACTCTGATGTGCCCTTGTGAATG-TCCTGGTCTAGCTGATG 27611 Query 104805 CCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGG--TCGGGCG-A 104861 || || || ||||| || | || |||||| || ||||||| || || | Sbjct 27612 TGTATGGCGATGAATTTGAGGCTTTATATGAAAAGTATGAACAAGAAGGGAAAGGCCGTA 27671 Query 104862 CTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACT 104920 | | || || | | | | ||| | | || || | | ||||| || ||| Sbjct 27672 GAACTATTATGGCA----CAAAAGCTATGGTACTCAATAATCGAAGCACAAACAGAAACT 27727 Query 104921 GGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTG 104980 ||||| || | ||||| |||||||| || ||||| ||||||| |||||||| ||| | Sbjct 27728 GGTACCCCTTTTATGCTCTACAAAGATGCATGTAATAAAAAGAGCAATCAAAAAAATCTC 27787 Query 104981 GGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAG 105040 || ||| || || ||||| ||||| ||||| | |||| || ||||| Sbjct 27788 GGGACTATCCGTAGCTCTAATCTTTGTACCGAAATTGTTGAATACTCATCTCCGGATGAA 27847 Query 105041 ACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG 105100 |||||| ||||| | ||||| | ||| | || | ||||| || ||| || Sbjct 27848 GTGGCTGTTTGTAATTTGGCATCCCTAGCTTTGCCGACCTATGTTAATACAGCTGATAAT 27907 Query 105101 ACATTTGATTATGAAAAACTCCACGAAGT 105129 || ||||||| | | ||||| || || || Sbjct 27908 ACTTTTGATTTTCACAAACTTCATGATGT 27936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583215422309760