Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq125 107 2e-18 >seq125 Length=45052 Score = 107 bits (118), Expect = 2e-18 Identities = 194/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || ||||| ||||| | || || || || || ||||||||||| ||| || | Sbjct 27621 TCGCCATACACATCAGCTAGACCAGGACATTCACAAGGGCACATCAGAGTCCATTCACCA 27562 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | || ||||| ||| ||| ||||| || || ||||| ||||| ||| || || || Sbjct 27561 TTTTTTTCAACTCTCTTCATAAAGAGATCAGGTATCCAAAGGGCATAGAATAGATCACGT 27502 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 ||| | || || | ||| || || || || ||||| || || | || |||||| Sbjct 27501 GCACGAACTTCTTCTTTGCCGTGATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCG 27442 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| ||||||| ||| || ||||| | ||| ||||| || || || | || Sbjct 27441 TGCCATGGCTCCAAATATATAGCGAATGCTCCCGGACGCTTATTACCACCTTGATCAACA 27382 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCC 79589 || | ||| || || ||||| ||||||||||| || || || || Sbjct 27381 TATCTGGCAGTATTATTGAAGACTCGGAGCATCGGTACAATACC 27338 Score = 102 bits (112), Expect = 9e-17 Identities = 193/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 19415 GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGC 19474 ||||| || || |||||||| |||||||| || || ||||| || || | || || || Sbjct 27338 GGTATTGTACCGATGCTCCGAGTCTTCAATAATACTGCCAGATATGTTGATCAAGGTGGT 27397 Query 19475 GGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 || || ||| | ||||| || || | |||||||||||||| || | | || Sbjct 27398 AATAAGCGTCCGGGAGCATTCGCTATATATTTGGAGCCATGGCACGCCGATATATTTGAG 27457 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 |||||||| || ||| || || || | || || | || || || || ||| Sbjct 27458 TTCCTCGACCTCCGCAAAAATCACGGCAAAGAAGAAGTTCGTGCACGTGATCTATTCTAT 27517 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTG 19654 ||| | ||||| || || || || ||| ||| ||||| || | | |||||| ||| Sbjct 27518 GCCCTTTGGATACCTGATCTCTTTATGAAGAGAGTTGAAAAAAATGGTGAATGGACTCTG 27577 Query 19655 ATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698 |||||||| ||||| ||||| ||| | || || || ||||| Sbjct 27578 ATGTGCCCTTGTGAATGTCCTGGTCTAGCTGATGTGTATGGCGA 27621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548482124770560