Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3947 221 1e-52 >seq3947 Length=15482 Score = 221 bits (244), Expect = 1e-52 Identities = 593/910 (65%), Gaps = 65/910 (7%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 ||||| || || |||||| |||||||| || ||||| || || | || || |||||| Sbjct 9247 TTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGCCAAAGAGATATTT 9188 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACA--A 4374 ||||| |||||||| ||||| | | ||||| | ||| | | || | | | | | Sbjct 9187 TCCATGAAATCAAATGGATTTTTGACTTTGTA-TACTTTGGA-ATTTCCTAACGAGAGGA 9130 Query 4375 GCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA 4434 | | ||| || || || ||||| || ||||| |||| || | ||| || || | || Sbjct 9129 GAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGTTCATGCCGAGTA 9070 Query 4435 -ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATT 4493 | | || || ||||| | || | ||| ||||||||||| ||||||| |||||| Sbjct 9069 GAGCGCAT-GGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGCTTGTGTGATA 9011 Query 4494 ATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCA 4553 | ||| | | | ||||||||| | | || | | ||| | | ||| ||| Sbjct 9010 ACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAGAGGAGACAAGCA 8951 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 || || || | |||||||| | ||| |||||||||||||| |||| || | | Sbjct 8950 AAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGGTTAGGCCAGCC 8891 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 || || |||| || || | |||||| || | ||||| || ||| || ||||| || Sbjct 8890 ATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGAAAAATATTCCC 8831 Query 4674 TCTACGGCGGCAAACGCTACTAATCGGGACCCGAA---CGAGCTGGCTTTGTCTTTAATC 4730 || || || ||||| ||||| | || || || ||| || ||||||||| |||| Sbjct 8830 TCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGA-CT--CTTTGTCTTGAATC 8774 Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTAT------------ 4778 || | ||||||| || |||||||||| || || | | || || Sbjct 8773 CAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATCGTTAACGATTA 8714 Query 4779 ------------------------------------ATAGCGTTAAATAATTTACTTTTT 4802 ||||| || || | | | ||||| Sbjct 8713 TCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAAGATAAGTTTTT 8654 Query 4803 TCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTT 4862 | | | | |||| || ||||| || |||| || ||| ||||||| || |||||| Sbjct 8653 TGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCAGAGTGGATATTT 8594 Query 4863 TCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAA 4922 || || ||| |||||||| |||||| ||||||| || | | || ||||| | | | Sbjct 8593 TCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCACTTCACTGCTA 8534 Query 4923 AATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACA 4982 || | || || | |||||| || || || ||||| ||| |||||||| || | ||| Sbjct 8533 AACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAAAGGCTAGCACA 8474 Query 4983 TGAGATATAAAGTACTGTTCGTCAGGCTT---AAGTTTTTTCCAGTGGGGCAAATCTTTA 5039 |||||||||||||| |||| ||| || | | || ||||| | | | | ||||||| Sbjct 8473 TGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGTGAATATCTTTA 8414 Query 5040 GTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAA 5099 | ||||||| || ||| |||||||||| || || || ||||||||||||||| ||| Sbjct 8413 GACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGTACATATGCCAT 8354 Query 5100 A--TATCAGG 5107 | ||||||| Sbjct 8353 ATCTATCAGG 8344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427017206152592