Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq125 704 0.0 seq3947 192 8e-44 >seq125 Length=45052 Score = 704 bits (780), Expect = 0.0 Identities = 1403/2064 (68%), Gaps = 47/2064 (2%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || |||||||| |||| |||||| | | |||||||| |||||||| |||||||||| Sbjct 28782 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCAGTTTTTAAG 28723 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || | ||||||| |||||||| ||||| | |||| | | || || | Sbjct 28722 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 28663 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 ||||||||||| ||||| ||||| || || || || | |||||| ||||| | || Sbjct 28662 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 28603 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 ||||| || | || ||||||| |||||| | | | ||| || || |||||| Sbjct 28602 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 28543 Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 |||| |||| ||||| || || ||||| ||||| || ||| || || | |||| | Sbjct 28542 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 28483 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 || || | | ||| | | || | || | ||||| || |||||||| ||||| Sbjct 28482 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 28423 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | || || | || | ||| |||||| ||||||||| || | | | ||||| ||| Sbjct 28422 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 28363 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | ||||||| ||| || |||||||| || || || | ||| ||||| | || ||| Sbjct 28362 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 28303 Query 77259 TGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCC 77318 | | || |||| | | |||| | | | ||||||||| | |||| |||| ||| || Sbjct 28302 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 28243 Query 77319 CAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGT 77378 || | ||||||||| || || | || || || | || || || || | Sbjct 28242 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 28183 Query 77379 CCTTCTGTTTCAGCTAGTTCACAACTC--GCTTCCAATGCTCCGTAATAAATTGTTTCGA 77436 ||| | ||| |||| ||| ||| | | | ||| | | ||| || ||||| | Sbjct 28182 CCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 28125 Query 77437 AAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAA 77496 | |||| || ||||||| || ||| || | || || || | | ||| | || Sbjct 28124 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 28065 Query 77497 AGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTT 77556 | ||||||||| || |||||||| | | | || |||| || | |||| | Sbjct 28064 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATTGCTCTTAC 28005 Query 77557 TAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTA 77616 |||||| || | |||||| ||||||| || || |||||||| ||||| ||||| || | Sbjct 28004 GAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACAA 27945 Query 77617 CTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATC-----TAT-AACAAACA 77670 | | | || || | ||||| |||||||||| | ||| ||| |||| | Sbjct 27944 CCTGACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATAGG 27885 Query 77671 TGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTA 77730 | |||||||| ||||| | ||||||||| || || |||| | | |||| | Sbjct 27884 TCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTCAA 27825 Query 77731 TTATCTCGGTACATAGATTA---CTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCT 77787 || |||||||| |||||| |||| |||||| || ||||||| ||| ||||||| Sbjct 27824 CAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTGCTCT 27768 Query 77788 TTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGA 77847 ||||||| |||| || || || || ||||| || || || ||||| | |||| ||||| Sbjct 27767 TTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTCGA 27708 Query 77848 TAATAGATTTCCAGACGACTCTAGCTTTTAT--CATAG-ATTTGTATCGCCTCTCTCTT- 77903 | || || | ||| |||||||| | |||| | || || |||| || ||| Sbjct 27707 TTATTGAGTACCA--------TAGCTTTTGTGCCATAATAGTTCTACGGCCTTTCCCTTC 27656 Query 77904 ----TCATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCA 77957 ||||| || |||| |||| ||||||||||| || | |||||| | | ||| Sbjct 27655 TTGTTCATACTTTTCATATAAAGCC--TCAAATTCATCGCCATACACATCAGCTAGACCA 27598 Query 77958 GGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAG 78017 || |||||| |||||||||| | ||| ||||||| || | ||||| ||||||||| Sbjct 27597 GGACATTCACAAGGGCACATCAGAGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAG 27538 Query 78018 AGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTA 78077 |||||||||||||| || ||| |||||||| || | | | |||||| || || | Sbjct 27537 AGATCAGGTATCCAAAGGGCATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGA 27478 Query 78078 TTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCC 78137 || || || ||||| ||||| | ||||| | |||||||| || | |||||| || Sbjct 27477 TTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCG 27418 Query 78138 ATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACT 78197 | |||| || || |||||||| || ||||| | ||||||||| || ||||| | ||| Sbjct 27417 AATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACT 27358 Query 78198 CTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTT 78257 | | ||| || | |||||| || || ||||||||||||| | |||||| || | Sbjct 27357 CGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTC 27298 Query 78258 GCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAA 78317 |||||||| | ||| || || || || || || | ||||| || | ||||||| Sbjct 27297 GCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAA 27238 Query 78318 CGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAG 78377 |||||| ||||||||||| || || ||||| || || |||| | || | ||| || Sbjct 27237 GTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCAT 27178 Query 78378 CTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAAC 78437 ||| | |||| || ||| || || ||||| || || || ||||||||||| Sbjct 27177 GAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAG 27118 Query 78438 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATT 78497 |||| | || | |||||| || || || ||||| ||||| ||||| ||| |||||| Sbjct 27117 TATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATT 27058 Query 78498 CCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTC 78557 || || || |||||||| | |||||| || || | || || | |||| ||| | Sbjct 27057 CCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGA-GGCG 26999 Query 78558 AACAAG-TATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTC 78616 || ||| |||||| |||||| ||| || || |||||||| | ||| |||||||| || Sbjct 26998 AAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATC 26939 Query 78617 GTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATC---CATGACAGT 78673 |||| || | ||||| || | | ||| | || ||||| | || ||| | | | Sbjct 26938 ATAAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACAT-AGATT 26880 Query 78674 AGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTC 78733 | || || || |||||| | |||||||| ||||| ||||| | | | ||| Sbjct 26879 TGCTG--ATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGA 26822 Query 78734 CATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGC 78793 | ||| | | ||| ||||||||||| |||||||||||||| |||||||| | ||| Sbjct 26821 GACTACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGC 26762 Query 78794 AGCTAGAATAGCATAATCAGGATG 78817 || |||||||| || || ||||| Sbjct 26761 TGCAAGAATAGCGTAGTCGGGATG 26738 >seq3947 Length=15482 Score = 192 bits (212), Expect = 8e-44 Identities = 587/913 (64%), Gaps = 62/913 (7%) Strand=Plus/Minus Query 47837 CATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 47896 ||| ||||| |||||||| ||||| || ||||| |||||||| ||||| || || | Sbjct 9260 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 9201 Query 47897 CAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCC 47956 ||| || ||||||||||| |||||||||||||| | || || | ||| | ||| Sbjct 9200 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 9141 Query 47957 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATT 48016 ||| | |||| ||||||||||||||| || || ||||||| || Sbjct 9140 TAACGAGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGTT 9081 Query 48017 CATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGC 48076 ||| || | || ||| || || || || ||||| |||||||| || ||| || Sbjct 9080 CATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGC 9021 Query 48077 --ATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAAC 48134 | || ||| || || | | || | |||| | | ||||||| ||| Sbjct 9020 TTGTGTGATAACATC-CTG-AACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAG 8963 Query 48135 ATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAAT 48194 | | ||| ||||| || || || ||||| || | ||| | |||||||||||| Sbjct 8962 AGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAG 8903 Query 48195 GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAA 48254 || || || | ||| | || ||||| || | |||||| || | || || || ||| Sbjct 8902 GTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTG 8843 Query 48255 AAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG---CTTCG 48311 || ||||| || || || || ||||| || ||| | | ||| | | | ||| | Sbjct 8842 AAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTTTG 8783 Query 48312 TTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCA----------- 48360 | || ||||| || ||||| |||| ||| ||||| | |||||| | Sbjct 8782 TCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATCGT 8723 Query 48361 -------------------------------------TTGTTTCTATAGCATTAAAGAGA 48383 |||| || |||||||| || ||| Sbjct 8722 TAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAAGA 8663 Query 48384 -AAGtttttt-tCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGG 48441 ||||||||| ||| |||||| | ||||||||| |||||||| ||| |||| | Sbjct 8662 TAAGTTTTTTGAGCTTG--ATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCAG 8605 Query 48442 AGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTA 48501 |||| |||||||| || || |||||||| ||||| |||| || || | ||||| | Sbjct 8604 AGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCA 8545 Query 48502 CCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561 | || | | ||| || || | | || ||||| || || || || || ||||||| Sbjct 8544 CTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAA 8485 Query 48562 ATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCAT 48618 | |||| ||||| ||||| ||| ||| | | | | | |||||||| || | Sbjct 8484 AGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGT 8425 Query 48619 TGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTAT 48678 |||||||| || | ||| | || ||||| |||||||| |||||||| |||||||| | Sbjct 8424 GAATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGT 8365 Query 48679 ACATATTCCATAT 48691 |||||| |||||| Sbjct 8364 ACATATGCCATAT 8352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694614754767360