Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08] 6,979 sequences; 49,465,130 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq3288 91.5 1e-13 >seq3288 Length=20993 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| ||||| ||||||||||||| || ||||| || || ||| ||| | || Sbjct 16515 ATGCAGATATTTGTCAAAACATTGACTGGGAAAACAATAACTCTTGAAGTAGAATCTTCA 16574 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | |||| || || |||||||||||| | || || ||| Sbjct 16575 GATACAATAGACAACGTCAAAAGTAAGATCCAAGATAAAGAAGGTATTCCACCGGACCAA 16634 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 |||||| | |||||||| || || ||| | |||||| ||| | ||||||||| Sbjct 16635 CAAAGATTGATCTTTGCTGGAAAGCAACTTGAAGATGGACGTACTCTTAACGATTACAAC 16694 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 || ||||||||||| ||||| ||| | ||| Sbjct 16695 ATACAAAAGGAATCGACTCTCCACTTAGTG 16724 Score = 82.4 bits (90), Expect = 6e-11 Identities = 74/91 (81%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCG 25206 |||||||||||| | |||||||| ||||||||| | || ||| || || | ||| | | Sbjct 16116 GATCAACAAAGATTAATCTTTGCTGGCAAACAACTTGAGGATGGTCGAACATTAT--CTG 16173 Query 25207 ATTACAATATTCAAAAGGAATCTACTCTTCA 25237 ||||||| |||||||| |||||||| ||||| Sbjct 16174 ATTACAACATTCAAAAAGAATCTACCCTTCA 16204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410761859036306