Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08] 6,979 sequences; 49,465,130 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1112 352 3e-92 seq2264 134 1e-26 >seq1112 Length=30899 Score = 352 bits (390), Expect = 3e-92 Identities = 1206/1855 (65%), Gaps = 61/1855 (3%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 ||||| ||||| | |||||| ||||| | | || | | || ||||| |||||| Sbjct 16260 TCAACGGTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCAGTT 16319 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTAT-GTAGGAT- 36907 |||| || ||| ||||||| |||||||||||| || | |||||| || || || | Sbjct 16320 TTTAAGCCTAATTTCCATCCAGCAAAATGCATACTTGTTA-TTTTGCCCATAGTTGGGTC 16378 Query 36908 TATCTA-TATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCC 36966 | || | | ||||| |||||| || ||||| ||||| ||||| | || || ||| Sbjct 16379 TTTCAAGTGAATATT--CATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCC 16436 Query 36967 ATTTCTAAAATACATTTT--TGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATAT 37024 || || || || | || || ||||||||||| ||||| || | | ||| || | Sbjct 16437 AT--CTGAATTATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTT 16494 Query 37025 TATCTGGTAAATCTAA---ATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTA 37081 |||| | || | | || |||||||| || || | | || ||| || | Sbjct 16495 CGGCTGGAATATTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCA 16554 Query 37082 TGTCATTATTCCACAT----ATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACA 37137 ||| || | ||| | || ||||| || ||| | | || ||||||||| Sbjct 16555 TGTTATCAGACCATAAGCCCATATCTACC----AGATCTTTGAGTAACCAGGGATTTACA 16610 Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 | ||||| ||||| | ||| || | | || |||||||| |||||||| |||| Sbjct 16611 ATTTGAAACTCTCCTGCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAA 16670 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 |||||||| | | |||||| |||| ||| || |||||||| |||| || | | Sbjct 16671 CACTCATTAAATCCAAGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAG 16730 Query 37258 CTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCT 37317 ||||| | | |||| | ||||| |||| || |||||||||||| ||| Sbjct 16731 CTATTCCGAAGGCCATAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCT 16790 Query 37318 GTTGGGTTCTTTAAC----CACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATC 37373 || || | |||| |||||||| ||||| || ||| | || || || | Sbjct 16791 GTAGG----TGTAACGCCCCACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCC 16846 Query 37374 GTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACT--AGATTCTAGTGCG 37431 | || ||||| || | || |||| |||| || |||| |||| ||| || Sbjct 16847 CTCGTAAGTCTCGTATGTACCTAGTTTTTTGGCTAAGTC--AACTGAAGATGTTAGAGCT 16904 Query 37432 GCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAAT 37491 |||| |||||| ||||| || || ||| | || | |||||| ||| |||||| Sbjct 16905 GCATGATATATGGTTTCAAAGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAAT 16964 Query 37492 GCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTA 37551 | ||| ||| | ||||||||| || | || ||||| || | | |||| |||| Sbjct 16965 GGCAAGCGCAAAGCCAAAAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGG 17024 Query 37552 TGTTTCTTATTAGATCTAGACGA--TTCTATCACTGGATAATAATTGATATCTATTATTT 37609 || ||| | ||| |||| ||| ||| ||||| ||||| | ||| || |||| Sbjct 17025 TGGCGTAAATT-GCTCTT-ACGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTT 17082 Query 37610 TATTTAGATTTTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACATAAATACG- 37668 |||| ||||| |||||| | | | || | || || ||| || || | Sbjct 17083 TATTCAGATTCCTAACTACAACCTGACAGAC-ATCATGAAGTTTGTGAAAATCAAAAGTA 17141 Query 37669 TTAT------TATTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACT 37722 |||| |||||||| | | ||| | | ||| | | |||||| ||||| ||| Sbjct 17142 TTATCAGCTGTATTAACATAGGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACT 17201 Query 37723 TCATCTTCGTTACTAA--ATTGTATAATCTCTGTACAGAGATTACTCGATCTA---ATTG 37777 ||||| || | | ||| | ||| || ||||| |||||| || ||| || | Sbjct 17202 TCATC--CGGAGATGAGTATTCAACAATTTCGGTACAAAGATTA---GAGCTACGGATAG 17256 Query 37778 TTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCG 37837 | || | ||| |||||||| ||||||||||| | |||||| || || ||| | || | Sbjct 17257 TCCCGAGATTTTTTTGATTGCTCTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGG 17316 Query 37838 TTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCG 37897 | || |||| |||| || ||||| || || | ||||| || ||| ||| | | Sbjct 17317 TACCAGTTTCTGTTTGTGCTTCGATTATTGAGTACCATAGCTTTTGTGCCATAA---TAG 17373 Query 37898 CTTTAAtttttttCT-TTGTT--TCGTATTCTATATATAATTTGTTAAAATCATTCCCCC 37954 | || |||| || || || || | | |||||| | ||| |||| || Sbjct 17374 TTCTACGGCCTTTCCCTTCTTGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCAT 17433 Query 37955 ATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTT 38014 | ||||| || || |||||||| || || ||||| || | |||||| ||| ||||| Sbjct 17434 ACACATCAGCTAGACCAGGACATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTT 17493 Query 38015 CTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTAT 38074 | || | | |||||| | |||||||| ||| | ||| |||| ||| | | | Sbjct 17494 CAACTCTCTTCATAAAGAGATCAGGTATCCAAAGGGCATAGAATAGATCACGTGCACGAA 17553 Query 38075 ATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATG 38134 |||||| || || ||| || | | | || || || |||||||| |||||||||| Sbjct 17554 CTTCTTCTTTGCCGTGATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATG 17613 Query 38135 GTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAA 38194 | || | ||| || | | |||||| || | |||| ||| || |||| || |||||| Sbjct 17614 GCTCCAAATATATAGCGAATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGG 17673 Query 38195 CTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGG 38254 | || ||||| | | || | ||| ||||| |||||||| || || || ||| | || | Sbjct 17674 CAGTATTATTGAAGACTCGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTG 17733 Query 38255 ATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTT 38314 ||||||| ||| | || || || | || || || || ||||| |||| || Sbjct 17734 CGATATAAGCACCTGTCGCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTT 17793 Query 38315 TTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTA 38374 | || || | |||||| ||| || ||||| | || || || ||||| || || || | Sbjct 17794 TAGAAATCATAGCGCAAGTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCA 17853 Query 38375 TTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAG 38434 | | || ||| || ||| | ||||| |||||| ||||| ||||| |||| Sbjct 17854 TATCAATTAAAAAGCATGAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAG 17913 Query 38435 GAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTA 38494 | || ||||| | || |||| | |||| |||||| || ||||| || || | Sbjct 17914 GGGAAGCATGCGTAAAGTATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAA 17973 Query 38495 TATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTA 38554 | ||| | |||||| || | || || | ||||| |||||||||||| | || | | Sbjct 17974 TGTCATCTTGGTGAATTCCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAA 18033 Query 38555 TTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATA 38609 |||||| ||| | ||| ||||| ||| |||| | || || | |||||||| Sbjct 18034 TTTTATCATTGAGGCGAAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATA 18088 >seq2264 Length=21137 Score = 134 bits (148), Expect = 1e-26 Identities = 302/454 (67%), Gaps = 0/454 (0%) Strand=Plus/Minus Query 11338 CTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATA 11397 ||||||||| |||| |||||| ||||||||| |||||||| || | | || |||| Sbjct 8705 CTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGCCAAAGAGATATT 8646 Query 11398 CTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAA 11457 ||||| || ||| ||||| | || ||| | ||||| | |||||| | Sbjct 8645 TTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCCTAACGAGAGGAG 8586 Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAG 11517 | || |||||| |||||||| || ||||| ||| | | ||||| || | || Sbjct 8585 AAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGTTCATGCCGAGTAG 8526 Query 11518 ATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTAT 11577 | | || | || | || | ||| || | |||||| | || || | |||| | Sbjct 8525 AGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGCTTGTGTGATAAC 8466 Query 11578 CGACGTTATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACACGCAAA 11637 | | | | |||||||||| || |||||| ||| | | ||| ||||| Sbjct 8465 ATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAGAGGAGACAAGCAAA 8406 Query 11638 ATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCAT 11697 || |||| |||||||| | || ||||| |||||||| |||| || | ||| Sbjct 8405 GTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGGTTAGGCCAGCCAT 8346 Query 11698 CAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTC 11757 ||| |||||||| || | |||||| || | |||||| |||||| || ||||||||||| Sbjct 8345 CAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGAAAAATATTCCCTC 8286 Query 11758 CACAGCTGCAAATGCTACTACTCTTTCTCCATAT 11791 ||| || ||||| ||||| | | || |||| || Sbjct 8285 CACTGCAGCAAAAGCTACAAGACGTTGTCCAAAT 8252 Score = 105 bits (116), Expect = 6e-18 Identities = 224/334 (67%), Gaps = 3/334 (1%) Strand=Plus/Minus Query 11850 TTGTTTCTATAGCGTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTA 11909 |||| || ||||| || || | || |||||| | |||| ||| || ||||| | Sbjct 8142 TTGTCTCGATAGCATTGAAAAGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGA 8083 Query 11910 TTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAAC 11969 |||| | ||| |||| || || ||||||||||| |||||||||||||| || Sbjct 8082 TTAAAAGCGAATAAGTTTCAGAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGA 8023 Query 11970 ATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAA 12029 ||| ||||| | | ||| || || ||| | || | | || ||||| |||| Sbjct 8022 ATCTAGCCTCAGGAATCTGCACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAA 7963 Query 12030 TACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAG 12089 | || || | |||||||| ||||| | ||| |||||||||| ||| || | | Sbjct 7962 TCCCGTCTGAGGCGGCAAAAAAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCAT 7903 Query 12090 TTA---ATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAA 12146 | | |||| |||||| | | |||||| || ||||| | || ||| | ||||||| Sbjct 7902 TGAGACGGTTATTCCAATCGTGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAA 7843 Query 12147 AACTTGCCACTGATTGTTTATACATTTTCCAGAT 12180 || |||| | | || ||| ||||| | ||| || Sbjct 7842 AAGATGCCTCGGCTTTTTTGTACATATGCCATAT 7809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468483927067760