Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08] 6,979 sequences; 49,465,130 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1112 569 3e-157 seq2264 183 4e-41 >seq1112 Length=30899 Score = 569 bits (630), Expect = 3e-157 Identities = 1381/2075 (67%), Gaps = 43/2075 (2%) Strand=Plus/Plus Query 70788 TTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACAT 70847 ||| | ||| | || |||||||| |||| ||||| || | |||||||| |||||||| Sbjct 16253 TTCTTGGTCAACGGTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACAT 16312 Query 70848 GCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGC 70906 ||| ||||||| || | ||||||| |||||||||||| |||| |||| |||| Sbjct 16313 GCCAGTTTTTAAGCCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGT 16372 Query 70907 TAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTG 70966 | || || | |||||||||||| ||||| ||||| || || || || | || | Sbjct 16373 TGGG-TCTTTCAAGTGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAG 16431 Query 70967 CAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAA 71026 ||||||| | || || || |||| || ||||||| ||||| || | | |||| Sbjct 16432 CAGCCATCTGAATTATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAA 16491 Query 71027 TATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTT 71083 | || |||||| |||| |||||||||| || || ||||| | || || | ||||| Sbjct 16492 TTTCGGCTGGAATATTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTT 16551 Query 71084 TGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTA 71143 | || | ||| |||||| | || | | || | || | ||||| || | Sbjct 16552 TCATGTTATCAGACCATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAA 16611 Query 71144 CTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTG 71203 |||||| ||||| | || || | || | ||| |||||| |||||| || || | Sbjct 16612 TTTGAAACTCTCCTGCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAAC 16671 Query 71204 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGAC 71263 |||||||| ||| | ||||||| || ||| || ||||| || || || | || | Sbjct 16672 ACTCATTAAATCCAAGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGC 16731 Query 71264 TATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCG 71323 |||| | ||| |||| | |||| | | |||| ||| ||||||| ||| | || | Sbjct 16732 TATTCCGAAGGCCATAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTG 16791 Query 71324 ATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCAT 71383 ||| ||| || | ||| || || | | Sbjct 16792 TAGGTGTAACGCCCCACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGT 16851 Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTC--GCCTCTAATGCTCCATA 71441 | || ||||||| ||| ||||| ||||| ||| ||| | || ||| ||| Sbjct 16852 AAGTCTCGTATGTACCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATG 16909 Query 71442 ATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATA 71501 ||| |||||||| || |||| || ||||||| || ||| || || || ||||| | Sbjct 16910 ATATATGGTTTCAAAGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAA 16969 Query 71502 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCT 71561 || | |||| | ||||||| |||||||| || | | | || |||| ||| | Sbjct 16970 GCGCAAAGCCAAAAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCG 17029 Query 71562 CTTATTAGAAATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGA 71620 ||| | || | |||||| || | |||||| ||||||| ||| || |||||||| | Sbjct 17030 TAAATT-GCTCTTACGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCA 17088 Query 71621 GATTTCTGACTATTACTTTGACC-ACATCCTTTAGTTTGAGAAAATCAAATCTCCCATC- 71678 |||| || |||| || | ||| ||||| | |||||| |||||||||| | ||| Sbjct 17089 GATTCCTAACTACAACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCA 17147 Query 71679 ----TATTACAAACACGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATT 71732 ||||| | | | || ||| || | ||||||| ||||||||| || || |||| Sbjct 17148 GCTGTATTA-ACATAGGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATC 17206 Query 71733 AGCATCGGCATATTGTATAATTTCAGTGCAAAGATTA---CTACACTTGATGGTTCCTAA 71789 | | | |||| | |||||| || ||||||||| |||| ||| || || | Sbjct 17207 CGGAGATGAGTATTCAACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAG 17263 Query 71790 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGT 71849 ||||| |||||| |||||||| ||||| ||||| || || || ||||| || |||||||| Sbjct 17264 ATTTTTTTGATTGCTCTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGT 17323 Query 71850 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-TTCTT-- 71906 ||| | || | ||| || || | | ||| | | | ||| || ||| |||| Sbjct 17324 TTCTGTTTGTGCTTCGATTATTGAGTACCATAGCTTTTGTGCC---ATAATAGTTCTACG 17380 Query 71907 GTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATT 71966 | | || |||| ||| || | | |||||| || || || || || | ||| Sbjct 17381 GCCTTTCCCTTCTTGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATC 17440 Query 71967 GTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCG 72026 ||| |||||||||||| || ||||||| | ||| || |||| | | |||| Sbjct 17441 AGCTAGACCAGGACATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCT 17500 Query 72027 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCT 72085 ||||||||||||||||| |||||||| || ||| |||||||| | | | | || | Sbjct 17501 CTTCATAAAGAGATCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTT 17559 Query 72086 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 72145 | || || ||| || || ||||||||| | | ||||| | ||||| || |||| Sbjct 17560 CTTTGCCGTGATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCA 17619 Query 72146 AGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 72205 | ||||| || | ||||||| || || || || || ||||| | ||||| || || | Sbjct 17620 AATATATAGCGAATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTAT 17679 Query 72206 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 72265 |||| | |||| | ||| || | ||||||||| || ||||| || || | ||||| Sbjct 17680 TATTGAAGACTCGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATAT 17739 Query 72266 AGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 72325 | || | || ||||| ||| || || || || || || ||||||| | Sbjct 17740 AAGCACCTGTCGCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAA 17799 Query 72326 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 72385 | | ||||| ||| || ||||| ||||| || || |||||||| || |||| | || Sbjct 17800 TCATAGCGCAAGTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAA 17859 Query 72386 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 72445 || ||| || ||| | ||| | ||| || || ||||| ||||| |||| Sbjct 17860 TTAAAAAGCATGAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAG 17919 Query 72446 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCC 72505 | |||||||| |||| | |||| |||||| || ||||| ||||| ||||| || || Sbjct 17920 CATGCGTAAAGTATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCAT 17979 Query 72506 ATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGT 72565 ||| || ||||| || ||||||||||||| |||||| || || | || || || || | Sbjct 17980 CTTGGTGAATTCCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTAT 18039 Query 72566 TATTTATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 72624 ||| | || ||| || ||| |||||| ||| || || |||||||| | ||| | Sbjct 18040 CATTGA-GGCGAAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTA 18098 Query 72625 AAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATC- 72683 |||||||| || |||| || | ||||| || | | | | || || |||| | || Sbjct 18099 AAGTCTCGATCATAAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCG 18158 Query 72684 --CATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 72741 ||| | | || || || ||||| |||||||||||| ||||| ||||| | | Sbjct 18159 TACATAGATTTGCT---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGG 18215 Query 72742 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACG 72801 | | ||| | |||| | ||| ||||||||||| ||||||||||| || || Sbjct 18216 TAGAGATCAGAGACAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACA 18275 Query 72802 GCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 ||||| | || || ||||| || || || ||||| Sbjct 18276 GCTATGCGTGCTGCAAGAATAGCGTAGTCGGGATG 18310 >seq2264 Length=21137 Score = 183 bits (202), Expect = 4e-41 Identities = 586/914 (64%), Gaps = 64/914 (7%) Strand=Plus/Minus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 ||| ||||| ||||| || ||||| || |||||||||||||| |||||||| || | Sbjct 8717 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 8658 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880 ||| || |||||||||||||||||||| ||||| | || || || | ||| | ||| Sbjct 8657 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 8598 Query 41881 CAATTCAGAAATCAA-TCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939 || ||| || || |||||| | |||||| || || ||||||| | Sbjct 8597 TAACG-AGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 8539 Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999 |||| || | || ||| || || |||| |||||||||||||| || ||| | Sbjct 8538 TCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGG 8479 Query 42000 CGTCTGTTATAATA----GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTA 42055 | | ||| |||| | || | |||| || || ||| | |||||| | Sbjct 8478 CTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTC----AAATGTGAA 8423 Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 || | | ||| || || || ||| || || || || | ||| | |||||| ||| Sbjct 8422 AAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAA 8363 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || || || || | ||| | || || || || | |||||| || || ||||| || ||| Sbjct 8362 AAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCA 8303 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCACT 42234 || || ||||| || ||||| ||||| || | ||| | | |||| | || | || Sbjct 8302 CTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCT 8243 Query 42235 --GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------T 42285 ||| || ||||| ||||| || | ||| || || | |||||| | | Sbjct 8242 TTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAAT 8183 Query 42286 CGTT-----------------------------------------TCTATGGCATTAAAG 42304 |||| || || ||||| || Sbjct 8182 CGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAA 8123 Query 42305 AGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCT 42364 ||||| |||||| | |||||| | || |||||||| ||||| ||| |||| Sbjct 8122 AGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCA 8063 Query 42365 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGT 42424 || || || ||||| || || |||||||| || || |||| ||||| | || ||| Sbjct 8062 GAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGC 8003 Query 42425 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAA 42484 ||||| | | ||| || || | | ||||| || || || ||||| ||| |||||| Sbjct 8002 ACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAA 7943 Query 42485 AACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTAAT-TTATTCCAATCA 42541 || || | ||||| |||||| ||| ||| || | || | ||||||||||| Sbjct 7942 AAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCG 7883 Query 42542 TTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTA 42601 | |||||||||||| | ||| | || || | |||||||| ||||| || || ||||| Sbjct 7882 TGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTG 7823 Query 42602 TACATATTCCAGAT 42615 ||||||| ||| || Sbjct 7822 TACATATGCCATAT 7809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671080651494040