Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08] 6,979 sequences; 49,465,130 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2264 194 2e-44 >seq2264 Length=21137 Score = 194 bits (214), Expect = 2e-44 Identities = 405/606 (67%), Gaps = 53/606 (9%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || |||||||| || |||| |||||||| ||||| || | || || || |||| Sbjct 8413 CAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGGTTAGG 8354 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || | | || ||||||||||| | |||||| || |||||||| |||| |||||| Sbjct 8353 CCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGAAAAAT 8294 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 || || ||||| || ||||| || |||| ||||| | | |||| | || | || Sbjct 8293 ATTCCCTCCACTGCAGCAAAAGCTACAAGACGTT-GTCCAAATGTCGACTCTTTGTCTTG 8235 Query 93272 A-TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT------------ 93318 | |||| | ||||| || | ||||||||||||||||||| | | Sbjct 8234 AATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATCGTTAACG 8175 Query 93319 -TT----CGATAGCGTT--AAATAGGTAAT------CTCGCTCG---------------- 93349 || |||||| || |||| || | | |||| | | Sbjct 8174 ATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAAGATAAGT 8115 Query 93350 --TCCGA-----ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGAC 93402 | || |||| |||||| ||||||||||| || ||||| ||||||| |||| Sbjct 8114 TTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCAGAGTGGAT 8055 Query 93403 ATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462 ||| ||||| |||||| ||||| || || ||||||| || | ||||||||||| Sbjct 8054 ATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCACTTCACT 7995 Query 93463 AGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAA 93522 ||| | ||| ||||| |||||||| || || || || || || |||||||| || | Sbjct 7994 GCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAAAGGCTAG 7935 Query 93523 TATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTATCCCAATCGGATAGATC 93579 | ||| |||||| | | |||||||| || | | |||| ||||||| | ||| Sbjct 7934 CACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGTGGATATC 7875 Query 93580 TTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATC 93639 ||| || | ||| | || || |||||||||| ||||| || |||||||||||||||| Sbjct 7874 TTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGTACATATG 7815 Query 93640 CCATAT 93645 |||||| Sbjct 7814 CCATAT 7809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556812220855960