Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08] 6,979 sequences; 49,465,130 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq3288 91.5 1e-13 >seq3288 Length=20993 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/156 (74%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 111262 GTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTAT 111321 |||||| ||||| ||||||||||| |||| |||||||||||| || |||| | Sbjct 15801 GTAAAAAGTAAAATACAAGACAAAGAAGGAATTCCACCCGATCAACAAAGACTAATTTTT 15860 Query 111322 GCGGGCAAACAATTGGAAGA--TTCTAAAACTATGGCCGATTATAATATACAAAAAGAAT 111379 || || |||||| | || || || || ||| | | || ||||| || |||||||||| Sbjct 15861 GCTGGAAAACAACTTGAGGACGGTCGAACACTTT--CTGACTATAACATCCAAAAAGAAT 15918 Query 111380 CTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 | ||||| || || || | ||||| || ||||||| Sbjct 15919 CGACACTCCACTTGGTCCTTCGTCTTCGTGGTGGCA 15954 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 111280 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111339 ||||| ||||| |||| |||||||||||| | || | ||| ||||||||| | || Sbjct 16095 GACAAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAAACAACTTGAG 16154 Query 111340 GAT--TCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGT 111397 ||| || || | ||| | ||||| || || |||||||||||||| || ||| |||| Sbjct 16155 GATGGTCGAACATTAT--CTGATTACAACATTCAAAAAGAATCTACCCTTCATCTAGTTC 16212 Query 111398 TGCGTCTGCGCGGTGG 111413 | ||||| || ||||| Sbjct 16213 TCCGTCTTCGTGGTGG 16228 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 111211 ACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAA 111270 || |||||||| || ||| | ||| ||| | ||| || | | | | |||||| Sbjct 15472 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCTGATACTATCGACAATGTAAAAAGC 15531 Query 111271 AAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAA 111330 |||||| |||||||||||| | || || ||||| || | |||| || || || Sbjct 15532 AAAATTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAAAG 15591 Query 111331 CAATTGGAAGAT--TCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTAC 111388 || ||||| ||| | || ||| | |||| || ||||||||||||||||| || || | Sbjct 15592 CAGTTGGAGGATGGCCGAACACTTT--CCGACTACAATATACAAAAAGAATCCACTCTTC 15649 Query 111389 ATTTAGTGTTGCGTCTGCGCGGTGG 111413 | ||||| | ||| | |||||||| Sbjct 15650 ACTTAGTCCTACGTTTACGCGGTGG 15674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423004017671800