Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08] 6,979 sequences; 49,465,130 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3919 125 7e-24 seq3288 93.3 4e-14 >seq3919 Length=22905 Score = 125 bits (138), Expect = 7e-24 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || ||||| ||||||||||| || || || ||||||||||||||| || | | Sbjct 11270 GATTCTTTTTGGATGTTGTAGTCAGACAATGTCCGGCCGTCCTCGAGTTGTTTTCCCGCA 11211 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || | ||| |||||||| || || || ||||| || || ||||||| ||||| | Sbjct 11210 AAAATCAAACGTTGTTGGTCAGGTGGAATGCCTTCCTTATCTTGGATTTTTGATTTTACA 11151 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | |||||| | ||||||||||| | ||| | |||||||| || || ||||| Sbjct 11150 TTGT-CGATGGTGTCCGATGACTCCACCTCAAGCGTAATAGTTTTACCCGTGAGGGTTTT 11092 Query 138600 TACAAAAATCTGCATG 138615 || ||||| |||||| Sbjct 11091 CACGAAAATTTGCATG 11076 >seq3288 Length=20993 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| | ||| | |||||||| | | || || || || ||||||||||| Sbjct 16514 GCCTCCTCTTAGACGAAGCACTAAATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGA 16455 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| || ||||| |||||||| || | | | |||| ||||||||||||||||| Sbjct 16454 TAAAGTTCGGCCATCCTCAAGTTGTTTTCCTGCAAATATTAATCGCTGTTGGTCCGGAGG 16395 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT-AATTGTTCCACGGTGTCGGTCGACTCCA 138565 || |||||||| || ||| |||| |||| | | || | |||||| | ||||| | Sbjct 16394 AATTCCTTCTTTATC-TTGAATTTTGCTTTTGACGTTATCAATGGTGTCAGAAGACTCGA 16336 Query 138566 CCTCGACCGTCAGCGTTTTACCAGT 138590 | |||| || | |||||||| || Sbjct 16335 CTTCGAGAGTAATAGTTTTACCGGT 16311 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||||| || | | || |||||||| |||||||| ||| | Sbjct 16741 CCACCGCGAAGACGAAGCACTAAGTGGAGAGTCGATTCCTTTTGTATGTTGTAATCGTTA 16682 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || ||||| || || | | |||| | | ||||||||||| || Sbjct 16681 AGAGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGGTGGA 16622 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||||||||| || ||| || ||| | | || | || || | || || || Sbjct 16621 ATACCTTCTTTATCTTGGATCTTACTTTTGACGTTGTCTATTGTATCTGAAGATTCTACT 16562 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || | || | ||||| ||||||| ||||| ||||| ||||||||| || Sbjct 16561 TCAAGAGTTATTGTTTTCCCAGTCAATGTTTTGACAAATATCTGCATGCCT 16511 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 || || || | ||| | ||||| ||| | | | || || |||||||||||||| || | | Sbjct 16228 CCACCACGAAGACGGAGAACTAGATGAAGGGTAGATTCTTTTTGAATGTTGTAATCAGAT 16169 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || ||||| |||||||| || | | |||||| | ||||| || || || Sbjct 16168 AAT-GTTCGACCATCCTCAAGTTGTTTGCCAGCAAAGATTAATCTTTGTTGATCGGGTGG 16110 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||||| ||| | | || | |||||||| ||||| || Sbjct 16109 AATTCCTTCCTTGTCCTGTATTTTACTTTTCACATTATCAATGGTGTCGGATGACTCTAC 16050 Query 138567 CTCGACCGTCAGCGTTTTACCAGT 138590 ||| | || | ||||||||||| Sbjct 16049 CTCAAGGGTAATGGTTTTACCAGT 16026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496219107308880