Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08] 6,979 sequences; 49,465,130 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1112 102 1e-16 >seq1112 Length=30899 Score = 102 bits (112), Expect = 1e-16 Identities = 479/755 (63%), Gaps = 13/755 (2%) Strand=Plus/Plus Query 116241 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 116300 ||| ||||| || || ||||| || || | | ||||| || || | | ||| ||| Sbjct 16982 AAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATTGCTCTT 17041 Query 116301 TCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 116360 ||||| ||| ||||| |||| ||| || | |||| ||||| | || Sbjct 17042 ACGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTAC 17101 Query 116361 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATA 116420 ||||| || |||||||| || | |||||||| | | || ||| ||||| Sbjct 17102 AACCTGACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATA 17161 Query 116421 CTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTC 116480 | || | || | || |||| |||||| |||| |||||| | | ||| || Sbjct 17162 GGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTC 17221 Query 116481 TATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTT 116540 | |||||| ||||| | ||| || || || || || | || |||||||| ||| Sbjct 17222 AACAATTTCGGTACAAAGATTAGAGCTACGGATAGTCCCGAGATTTTTTTGATTGCTCTT 17281 Query 116541 TGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAG 116600 | | ||||| ||||| |||||||||||| | || || || || || ||||| | | || Sbjct 17282 TTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTCGAT 17341 Query 116601 AATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTT---GGCTCGCCCCTCCTCCT 116656 || | | ||||| | | | || || | | | | | || ||| || | | Sbjct 17342 TATTGAGTACCATAGCTTTTG----TGCCATAATAGTTCTACGGCCTTTCCCTTCTTGTT 17397 Query 116657 CGTACTTTGTGTAGAGGGCCTCAAACTCTTCACC-CACAGCCTCTGAGAGCCCTGGTGCC 116715 | |||||| || | |||||||| || || || ||| | || | || || || Sbjct 17398 CATACTTTTCATATAAAGCCTCAAATTCATCGCCATACA-CATCAGCTAGACCAGGACAT 17456 Query 116716 TTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCT 116775 | | || || | || | ||||| |||| | ||||| | |||||| ||||| || Sbjct 17457 TCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGATCA 17516 Query 116776 GGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGA 116835 || ||||| || || |||| ||||| || ||| ||||||| | || ||||| Sbjct 17517 GGTATCCAAAGGGCATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATTTTTG 17576 Query 116836 CGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGAC 116895 || | || | || || | ||||| |||||||| || |||| || | |||| || Sbjct 17577 CGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAATGCT 17636 Query 116896 CCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGC 116952 ||| || | |||| | || | ||||| || || || || || || || ||| Sbjct 17637 CCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCGGAGC 17696 Query 116953 ATTGGAATGATACCATCAGATTGGCCATTTGTCCC 116987 || || | ||||||| || | |||||||| || Sbjct 17697 ATCGGTACAATACCATTTGAGTTTCCATTTGTTCC 17731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613453679165640