Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08]
6,979 sequences; 49,465,130 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq3919 118 2e-21
seq3288 96.9 8e-15
>seq3919
Length=22905
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || || || ||||| || || ||||||| ||||||||||| ||| |||
Sbjct 11297 CGAAGACGAAGTACGAGATGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAATGTC 11238
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || || || ||||| || || || | ||| || ||||| || ||| |||
Sbjct 11237 CGGCCGTCCTCGAGTTGTTTTCCCGCAAAAATCAAACGTTGTTGGTCAGGTGGAATGCCT 11178
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || || ||| || || |||| |||||| | || || || || | |
Sbjct 11177 TCCTTATCTTGGATTTTTGATTTTACATTGTCGATGGTGTCCGATGACTCCACCTCAAGC 11118
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || ||||||||||| |||||||| ||||||||
Sbjct 11117 GTAATAGTTTTACCCGTGAGGGTTTTCACGAAAATTTG 11080
>seq3288
Length=20993
Score = 96.9 bits (106), Expect = 8e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | |||||||||||| |||||||| | |||||| || | |||
Sbjct 16735 CGAAGACGAAGCACTAAGTGGAGAGTCGATTCCTTTTGTATGTTGTAATCGTTAAGAGTA 16676
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||||||| || |||||||| || ||||| | | || |||||||| ||| |||
Sbjct 16675 CGTCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGGTGGAATACCT 16616
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| || || ||||| || ||| || | || |||| | |||||| || |
Sbjct 16615 TCTTTATCTTGGATCTTACTTTTGACGTTGTCTATTGTATCTGAAGATTCTACTTCAAGA 16556
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || | ||||| ||||| || ||
Sbjct 16555 GTTATTGTTTTCCCAGTCAATGTTTTGACAAATATCTG 16518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178816182672593
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |