Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08] 6,979 sequences; 49,465,130 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2478 105 8e-18 >seq2478 Length=25480 Score = 105 bits (116), Expect = 8e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 153253 GAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATAT 153312 |||| || | || |||||| | ||||| || |||||| || ||||| | ||||| | Sbjct 4742 GAAATGTATTAGAAAATCCTGGATGGTATACTAGTTACACCCCATATCAGCCAGAGATTT 4801 Query 153313 CTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGAT 153372 |||| ||||||||||| | | || |||| ||||| | ||| || | || | | Sbjct 4802 CTCAAGGAAGATTGGAGTCACTGTTAAATTTTCAAACATTGGTCAGTGATTTGACGGCTT 4861 Query 153373 TACCAATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCA 153425 ||||||| ||||| |||||||||||||| ||| |||| || || || |||||| Sbjct 4862 TACCAATTGCAAATGCATCTCTATTAGACGAACCAACGGCCGCTGCTGAAGCA 4914 Score = 96.9 bits (106), Expect = 4e-15 Identities = 199/296 (67%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 153732 GGTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 153791 ||||||| ||| ||||| ||| | || ||| || || ||||| | || | ||| Sbjct 5248 GGTGAGTTTGGAGCGGATATAGCTTTTGGAAGTGCCCAGAGATTTGGAGTACCATTAGGA 5307 Query 153792 TATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCT 153851 | ||| ||||||||||| || |||||||| || |||||||| | || || ||| Sbjct 5308 TTTGGCGGTCCTCATGCCGCTTTCTTTGCTGTGGATGAGAAGTATAAACGTAAAATTCCT 5367 Query 153852 GGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTA 153911 || ||| | | || || ||||| || |||| ||| | || | |||| Sbjct 5368 GGTAGATTAATTGGAATTTCCAAGGATAGACTGGGAAATAGAGCTTTGAGGCTTTCACTT 5427 Query 153912 CAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAG 153971 || || | || |||||||| | | || || || ||||| || | || ||||| ||| Sbjct 5428 CAAACCCGTGAACAGCATATTCGCCGCGAAAAGGCCACCAGCAATTTATGTACAGCACAG 5487 Query 153972 GCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACT 154027 || || || ||||||||| ||| ||||||| ||||||||| || |||| || Sbjct 5488 GCTCTCCTAGCTAATATGACTGCTCTCTATGCGATGTATCATGGTCCAAATGGCCT 5543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579162270923360