Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08] 6,979 sequences; 49,465,130 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1112 149 3e-31 >seq1112 Length=30899 Score = 149 bits (164), Expect = 3e-31 Identities = 313/461 (68%), Gaps = 8/461 (2%) Strand=Plus/Plus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||| ||| |||||| |||||| ||| |||||| | ||| || ||||| | ||||| || Sbjct 17477 CCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGATCAGGTATCCAAAGGGCATAGAA 17536 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 || ||| | || | | ||||||||| |||||||| || || || | ||| ||||| Sbjct 17537 TAGATCACGTGCACGAACTTCTTCTTTGCCGTGATTTTTGCGGAGGTCGAGGAACTCAAA 17596 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA-CTACCTTTT-CTTTTTCCTCCA 26083 ||||| | ||||||||| || ||||| ||||| || || || ||| || | || Sbjct 17597 TATATCGGCGTGCCATGGCTCCAAATATATAGCGAATGCTCCCGGACGCTTATTAC--CA 17654 Query 26084 CCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTT 26143 |||||||| || ||||| ||||| | |||||| ||| | ||| || || | ||| || Sbjct 17655 CCTTGATCAACATATCTGGCAGTATTATTGAAGACTCGGAGCATCGGTACAATACCATTT 17714 Query 26144 GAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATA 26203 || ||| ||||| | || | | ||||||| | ||| ||| || | Sbjct 17715 GAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGCGCGAATCCGATGAATATTTAAG 17774 Query 26204 CCGATTCCACCAGCCCATTTTGAAATAGCTGCACAA--TCTGAAACTGTATCGAAAATTC 26261 || || ||||| || ||| ||||| || ||| | | ||| |||||| | |||| Sbjct 17775 CCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGTTTTCAAA--GTATCGTAGATTC 17832 Query 26262 CTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTG 26321 | | || ||||| ||||||| | | |||||| || ||||| | ||| || || | | Sbjct 17833 CATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGAAGAGAGTTGAGATTGTGGAG 17892 Query 26322 TTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362 | || | ||||| || || | |||||| ||| | ||| Sbjct 17893 TACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTAT 17933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253018477287425