Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08] 6,979 sequences; 49,465,130 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq3288 131 3e-25 seq3919 102 1e-16 >seq3288 Length=20993 Score = 131 bits (144), Expect = 3e-25 Identities = 142/186 (76%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 146055 ACAGGAAAAACAATTACTATTGATGTAGAA-CATAACGATACTATTCAAAATGTAAAAAA 146113 || || ||||| ||||| |||| ||||| ||| ||| || ||| | ||||| |||| Sbjct 16026 ACTGGTAAAACCATTACCCTTGAGGTAGAGTCATC-CGACACCATTGATAATGTGAAAAG 16084 Query 146114 TAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAA 146173 ||||||||| || ||||| ||||||||||||||||||||| | || ||||| || || Sbjct 16085 TAAAATACAGGACAAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAA 16144 Query 146174 ACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCA 146233 |||| | || ||| | |||| ||| | ||||| || || ||||||||||| || | || Sbjct 16145 ACAACTTGAGGATGGTCGAACATTATCTGATTACAACATTCAAAAAGAATCTACCCTTCA 16204 Query 146234 TTTAGT 146239 | |||| Sbjct 16205 TCTAGT 16210 Score = 127 bits (140), Expect = 3e-24 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 146055 ACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAAT 146114 || |||||||| || ||| | || || || || || || | |||||||||| | Sbjct 15750 ACTGGAAAAACCATCACTCTAGAGGTCGAGTCGTCTGACACCATCGACAATGTAAAAAGT 15809 Query 146115 AAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAA 146174 ||||||||| |||||||| ||||||||||||||||||||||| |||||||| || ||| Sbjct 15810 AAAATACAAGACAAAGAAGGAATTCCACCCGATCAACAAAGACTAATTTTTGCTGGAAAA 15869 Query 146175 CAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCAT 146234 ||| | || || | |||| | | || ||||| || |||||||||||||| |||| Sbjct 15870 CAACTTGAGGACGGTCGAACACTTTCTGACTATAACATCCAAAAAGAATCGACACTCCAC 15929 Query 146235 TTAGT 146239 || || Sbjct 15930 TTGGT 15934 Score = 109 bits (120), Expect = 9e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 146055 ACAGGAAAAACAATTACTATTGATGTAGAA-CATAACGATACTATTCAAAATGTAAAAAA 146113 || || ||||| || || |||| || ||| ||| |||||||| | |||||||||| Sbjct 15472 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCT-GATACTATCGACAATGTAAAAAG 15530 Query 146114 TAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAA 146173 ||||| || ||||||||||| ||||| || ||||| ||| | ||||| || || || Sbjct 15531 CAAAATTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAAA 15590 Query 146174 ACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCA 146233 || || || ||| |||| | | || || ||||||||||||||||| ||| | || Sbjct 15591 GCAGTTGGAGGATGGCCGAACACTTTCCGACTACAATATACAAAAAGAATCCACTCTTCA 15650 Query 146234 TTTAGTATTACGATTAAGAGGAGG 146257 ||||| |||| ||| | || || Sbjct 15651 CTTAGTCCTACGTTTACGCGGTGG 15674 >seq3919 Length=22905 Score = 102 bits (112), Expect = 1e-16 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| ||| | ||||| | || || ||||| ||||| |||| || || ||| Sbjct 11078 TGCAAATTTTCGTGAAAACCCTCACGGGTAAAACTATTACGCTTGAGGTGGAGTCATCG- 11136 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || | ||||||||| ||||| ||| ||| |||||||||||||| || ||| Sbjct 11137 GACACCATCGACAATGTAAAATCAAAAATCCAAGATAAGGAAGGCATTCCACCTGACCAA 11196 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | | |||||||| || |||||| | || || | || || | || || || Sbjct 11197 CAACGTTTGATTTTTGCGGGAAAACAACTCGAGGACGGCCGGACATTGTCTGACTACAAC 11256 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTA 146240 || ||||||||||| ||| | ||| | ||| Sbjct 11257 ATCCAAAAAGAATCTACTCTTCATCTCGTA 11286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786097816808680