Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08] 6,979 sequences; 49,465,130 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1112 262 9e-65 seq1983 100 7e-16 >seq1112 Length=30899 Score = 262 bits (290), Expect = 9e-65 Identities = 538/798 (67%), Gaps = 9/798 (1%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 |||||||| ||||| ||||| ||| | | ||| | ||||| |||||| | || | Sbjct 18088 TATTTTGGCTTCAAGACTCTGGAAAGATCATATCTTCTTCGCCTCAATGATAAAATTGTG 18029 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 || || || ||||| ||| | | ||||| || |||| ||||| | |||| ||| || Sbjct 18028 GAGCGGCCACAACATATGATAATGCGTGTCGCTGTTGGAATTCACCAAGATGACATTGAA 17969 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 ||| ||| || |||| || || | || || | || |||||| | ||||| Sbjct 17968 TCTGCTATAGAGACTTATAATCTAATGTCCAATAAATACTTTACGCATGCTTCCCCTACT 17909 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 |||||| || || ||| | ||| | |||| |||||| | | | || || Sbjct 17908 CTATTTGCAGCCGGTACTCCACAATCTCAACTCTCTTCATGCTTTTTAATTGATATGAAA 17849 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACT---GCTCTTATTTCTAAA 110600 || ||| |||||| || || || ||| || | ||| ||| ||| | ||||||||| Sbjct 17848 GAGGATAGTATTGATGGAATCTACGATACTTTGAAA---ACTTGCGCTATGATTTCTAAA 17792 Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660 || | || || ||||| | | ||||| |||||| | | ||| || |||||||| Sbjct 17791 AATGCCGGTGGTATTGGCTTAAATATTCATCGGATTCGCGCGACAGGTGCTTATATCGCA 17732 Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720 | | || || |||| ||| |||| || ||| | |||||||||| | ||||| Sbjct 17731 GGAACAAATGGAAACTCAAATGGTATTGTACCGATGCTCCGAGTCTTCAATAATACTGCC 17672 Query 110721 AAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCT 110777 | |||||| ||||||||||||| | | || |||| ||||| ||| | || || Sbjct 17671 AGATATGTTGATCAAGGTGGTAATAAGCGTCCGGGAGCATTCGCTATATATTTGGAGCCA 17612 Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837 ||||| | ||||||||||| ||| | || || || |||||||| || |||||| Sbjct 17611 TGGCACGCCGATATATTTGAGTTCCTCGACCTCCGCAAAAATCACGGCAAAGAAGAAGTT 17552 Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAA 110897 | ||||||||| |||| ||||| | ||||| | ||| | || ||||| | ||| || Sbjct 17551 CGTGCACGTGATCTATTCTATGCCCTTTGGATACCTGATCTCTTTATGAAGAGAGTTGAA 17492 Query 110898 GAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATAT 110957 ||||||| ||| | || ||||| ||| | | |||||||||| ||||||| ||| Sbjct 17491 AAAAATGGTGAATGGACCCTGATGTGCCCTTGTGAATGTCCTGGTCTAGCTGATGTGTAT 17432 Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAA 111017 || | || ||||| | | || ||||| |||||| ||||||| || || | | Sbjct 17431 GGCGATGAATTTGAGGCTTTATATGAAAAGTATGAACAAGAAGGGAAAGGCCGTAGAACT 17372 Query 111018 ATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCT 111077 ||| || ||| | || |||| | ||| | ||| ||||| |||||||| || ||| Sbjct 17371 ATTATGGCACAAAAGCTATGGTACTCAATAATCGAAGCACAAACAGAAACTGGTACCCCT 17312 Query 111078 TATATTTTGTATAAAGAT 111095 | ||| | || |||||| Sbjct 17311 TTTATGCTCTACAAAGAT 17294 >seq1983 Length=7178 Score = 100 bits (110), Expect = 7e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 305293 TGATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATC 305352 |||||||||| || ||| | | || |||| ||||| || |||||||||||||| Sbjct 2096 TGATATTGTTGAGAGGCATCTAGAAGATGGTGATATTGTTCTCTTTAATAGGCAACCATC 2155 Query 305353 ACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCG 305412 || ||||| | ||| ||| |||| | || || || | | || ||| | Sbjct 2156 CCTTCATAAGCTTAGTATCATGAGTCATTATGTAAAGGTTAGGCCATGGCGAACCTTTAG 2215 Query 305413 ATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATAT 305472 ||| || | |||| ||||||||||| ||||| || ||||||||||||||||||||| | Sbjct 2216 ATTGAACGAGTGTGCCTGTACGCCTTACAATGCAGACTTTGATGGAGATGAAATGAATCT 2275 Query 305473 GCATGTACCTCAA 305485 || ||||||||| Sbjct 2276 ACACGTACCTCAA 2288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186706677053819