Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08] 6,979 sequences; 49,465,130 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3288 120 3e-22 >seq3288 Length=20993 Score = 120 bits (132), Expect = 3e-22 Identities = 145/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 ||||| ||||| || || | |||||| | ||||| | || ||| ||||| || ||| Sbjct 16038 ATTACCCTTGAGGTAGAGTCATCCGACACCATTGATAATGTGAAAAGTAAAATACAGGAC 16097 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 || ||||| || |||||||||||||| | ||||| | || ||||||||| | || || Sbjct 16098 AAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAAACAACTTGAGGA- 16156 Query 27144 AGTTCGACCGTT-TCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 | |||| | || || ||||||||||||||||| || || ||| | ||| | ||| | || Sbjct 16157 TGGTCGAACATTATCTGATTACAACATTCAAAAAGAATCTACCCTTCATCTAGTTCTCCG 16216 Query 27203 TTTGCGGGGTGGCAT 27217 | | || ||||| || Sbjct 16217 TCTTCGTGGTGGTAT 16231 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||||||||| ||||| |||| || || | || ||||||||||| ||| | || Sbjct 16514 CATGCAGATATTTGTCAAAACATTGACTGGGAAAACAATAACTCTTGAAGTAGAATCTTC 16573 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || || | |||||| || || ||||| |||||||| || ||||| || || Sbjct 16574 AGATACAATAGACAACGTCAAAAGTAAGATCCAAGATAAAGAAGGTATTCCACCGGACCA 16633 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || || || ||| | ||||| | || || ||||||||| Sbjct 16634 ACAAAGATTGATCTTTGCTGGAAAGCAACTTGAAGATGGACGTACTCTTAACGATTACAA 16693 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| |||||||| ||||| | || || || | ||| | || ||||| Sbjct 16694 CATACAAAAGGAATCGACTCTCCACTTAGTGCTTCGTCTTCGCGGTGG 16741 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 ||||| || |||||||||| ||||| || | || ||| | ||||| | |||||| Sbjct 16311 ACCGGTAAAACTATTACTCTCGAAGTCGAGTCTTCTGACACCATTGATAACGTCAAAAGC 16370 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 ||||||||||| |||||||| || || || || |||||||| ||||||| || || ||| Sbjct 16371 AAAATTCAAGATAAAGAAGGAATTCCTCCGGACCAACAGCGATTAATATTTGCAGGAAAA 16430 Query 27132 CAATTGGAAGACAGTTCGACCGTT-TCCGATTACAACATTCAAAAGGAGTCGACCTTACA 27190 ||| | || || | ||| | || || || |||||||| || || || || || | || Sbjct 16431 CAACTTGAGGA-TGGCCGAACTTTATCAGACTACAACATCCAGAAAGAATCCACTCTTCA 16489 Query 27191 TTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || | ||| | | || ||||| Sbjct 16490 TTTAGTGCTTCGTCTAAGAGGAGGCAT 16516 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 || ||||| || || || |||| ||| | || || | || ||| ||||| |||||| Sbjct 15762 ATCACTCTAGAGGTCGAGTCGTCTGACACCATCGACAATGTAAAAAGTAAAATACAAGAC 15821 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 |||||||| || |||||||||||||| | |||| | || || |||||| | || ||| Sbjct 15822 AAAGAAGGAATTCCACCCGATCAACAAAGACTAATTTTTGCTGGAAAACAACTTGAGGAC 15881 Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 || || |||| || || ||||| ||||| || ||||| | || ||||| | ||| Sbjct 15882 GGTCGAACACTTTCTGACTATAACATCCAAAAAGAATCGACACTCCACTTGGTCCTTCGT 15941 Query 27204 TTGCGGGGTGGCAT 27217 | || |||||||| Sbjct 15942 CTTCGTGGTGGCAT 15955 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 || ||||| |||| || |||||||| ||| | || || | || || | || ||| Sbjct 15472 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCTGATACTATCGACAATGTAAAAAGC 15531 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 |||||||| |||||||||||||| ||||| || |||||| | || || | ||| || || Sbjct 15532 AAAATTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAAAG 15591 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || ||||| || | || ||||||| ||||| || ||||| || || || | || Sbjct 15592 CAGTTGGAGGATGGCCGAACACTTTCCGACTACAATATACAAAAAGAATCCACTCTTCAC 15651 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || | ||||| || ||||| || Sbjct 15652 TTAGTCCTACGTTTACGCGGTGGAAT 15677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434880458806080