Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08] 6,979 sequences; 49,465,130 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq3288 91.5 1e-13 >seq3288 Length=20993 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/156 (74%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 111175 GTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTAT 111234 |||||| ||||| ||||||||||| |||| |||||||||||| || |||| | Sbjct 15801 GTAAAAAGTAAAATACAAGACAAAGAAGGAATTCCACCCGATCAACAAAGACTAATTTTT 15860 Query 111235 GCGGGCAAACAATTGGAAGA--TTCTAAAACTATGGCCGATTATAATATACAAAAAGAAT 111292 || || |||||| | || || || || ||| | | || ||||| || |||||||||| Sbjct 15861 GCTGGAAAACAACTTGAGGACGGTCGAACACTTT--CTGACTATAACATCCAAAAAGAAT 15918 Query 111293 CTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 | ||||| || || || | ||||| || ||||||| Sbjct 15919 CGACACTCCACTTGGTCCTTCGTCTTCGTGGTGGCA 15954 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 111193 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111252 ||||| ||||| |||| |||||||||||| | || | ||| ||||||||| | || Sbjct 16095 GACAAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAAACAACTTGAG 16154 Query 111253 GAT--TCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGT 111310 ||| || || | ||| | ||||| || || |||||||||||||| || ||| |||| Sbjct 16155 GATGGTCGAACATTAT--CTGATTACAACATTCAAAAAGAATCTACCCTTCATCTAGTTC 16212 Query 111311 TGCGTCTGCGCGGTGG 111326 | ||||| || ||||| Sbjct 16213 TCCGTCTTCGTGGTGG 16228 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 111124 ACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAA 111183 || |||||||| || ||| | ||| ||| | ||| || | | | | |||||| Sbjct 15472 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCTGATACTATCGACAATGTAAAAAGC 15531 Query 111184 AAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAA 111243 |||||| |||||||||||| | || || ||||| || | |||| || || || Sbjct 15532 AAAATTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAAAG 15591 Query 111244 CAATTGGAAGAT--TCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTAC 111301 || ||||| ||| | || ||| | |||| || ||||||||||||||||| || || | Sbjct 15592 CAGTTGGAGGATGGCCGAACACTTT--CCGACTACAATATACAAAAAGAATCCACTCTTC 15649 Query 111302 ATTTAGTGTTGCGTCTGCGCGGTGG 111326 | ||||| | ||| | |||||||| Sbjct 15650 ACTTAGTCCTACGTTTACGCGGTGG 15674 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||||||||| ||||| || ||||| || || | ||| ||| | Sbjct 16515 ATGCAGATATTTGTCAAAACATTGACTGGGAAAACAATAACTCTTGAAGTAGAATCTTCA 16574 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | | | | | || ||| || || || |||||||| |||| || ||| Sbjct 16575 GATACAATAGACAACGTCAAAAGTAAGATCCAAGATAAAGAAGGTATTCCACCGGACCAA 16634 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | || | ||| || || ||| | |||||| ||| | |||||| || Sbjct 16635 CAAAGATTGATCTTTGCTGGAAAGCAACTTGAAGATGGACGTACTCTTAACGATTACAAC 16694 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 |||||||| ||||| || || || |||||| | ||||| |||||||| Sbjct 16695 ATACAAAAGGAATCGACTCTCCACTTAGTGCTTCGTCTTCGCGGTGG 16741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421775322189304