Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2084 513 2e-140 seq3986 210 3e-49 >seq2084 Length=12802 Score = 513 bits (568), Expect = 2e-140 Identities = 1360/2061 (66%), Gaps = 41/2061 (2%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||| ||||| ||||| ||||| | | |||||||| |||||||| || ||||||| Sbjct 7102 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCAGTTTTTAAG 7161 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || | ||||||| ||||||||||||||||| |||| | | || ||| | Sbjct 7162 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 7221 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 || |||||||| || || ||||| || || || || | || |||||||| | || Sbjct 7222 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 7281 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047 || || |||| || ||||||| ||||| || | | ||||| || |||||| Sbjct 7282 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 7341 Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104 |||| ||||||||||||| || ||||| || || | ||| || || | |||| | Sbjct 7342 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 7401 Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164 ||||| | || | | || | || | ||||| || | |||||| ||||| Sbjct 7402 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 7461 Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224 | || || | || | ||| |||||| |||||| || || | | |||||||| ||| Sbjct 7462 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 7521 Query 53225 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 53284 | ||||||| || ||| || ||||| || || || | ||| ||||| | ||| || Sbjct 7522 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 7581 Query 53285 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 53344 || | || |||| | | |||| || ||||||| ||| | || | ||| ||| Sbjct 7582 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 7641 Query 53345 NNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGT 53404 ||| || ||| | |||| || || | || || ||||||| Sbjct 7642 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 7701 Query 53405 CCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAATGGTTTCGA 53462 ||| || | |||| ||| ||| | || || | | ||| |||||||| | Sbjct 7702 CCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 7759 Query 53463 AGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAA 53522 |||||| || || |||| || ||| || | || ||||| | || | || Sbjct 7760 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 7819 Query 53523 ACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTT 53582 || | ||||||| |||||||| || | | | || |||| || | ||| | || Sbjct 7820 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATT-GCTCTTA 7878 Query 53583 C-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATT 53641 | |||||| || | |||||| ||||||| ||| || |||||||| || || || || | Sbjct 7879 CGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACA 7938 Query 53642 ACTTTGACC-ACATCCTTCAGTTTGAGAAAATCAAA----TTGTCCA-TCTATTA-CAAA 53694 || | ||| ||||| | |||||| |||||||||| || || | ||||| || | Sbjct 7939 ACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATA 7997 Query 53695 CATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTG 53754 | ||| || | ||||||| ||||||||| || || |||| | | | |||| Sbjct 7998 GGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTC 8057 Query 53755 TATTATCTCAGTGCAAAGATTA---CTACACTTGATGGTTCCTAAATTTTGTTGATTACT 53811 | || || || ||||||||| |||| ||| || || | ||||| |||||| || Sbjct 8058 AACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTGCT 8114 Query 53812 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTC 53871 |||||| ||||| ||||| || || || || || || ||||||||||| | || | ||| Sbjct 8115 CTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTC 8174 Query 53872 TATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT-T 53930 || || | | ||| | | ||| || |||| || || | |||| ||| | Sbjct 8175 GATTATTGAGTACCATAGCTTTTGTGCC---ATAATAG--TTCTACGGCCTTTCCCTTCT 8229 Query 53931 CGT--ATAGTGT--ATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 53986 || ||| | | ||| || ||||| || || || | |||| | | |||||| Sbjct 8230 TGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATCAGCTAGACCAGGA 8289 Query 53987 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 54046 |||||| || ||||||| | ||| || || | | | |||| |||||||||||| Sbjct 8290 CATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGA 8349 Query 54047 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 54105 ||||| |||||||| || ||| |||||||| | | | | ||| || || || ||| Sbjct 8350 TCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATT 8408 Query 54106 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCAT 54165 || || ||||||||| | | ||||| | ||||| || ||||| ||||| | | Sbjct 8409 TTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAA 8468 Query 54166 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 54225 |||| || || || || || || ||||| | ||||| || || ||||| | |||| Sbjct 8469 TGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCG 8528 Query 54226 CAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGC 54285 | ||| || | ||||||||| || ||||| || || | |||||| || | || Sbjct 8529 GAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGC 8588 Query 54286 ACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCG 54345 ||||| | ||| || || || || || || ||||||| || | ||||| Sbjct 8589 GCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGT 8648 Query 54346 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 54405 ||| || ||||| ||||| || || |||||||| || |||| | || || ||| || Sbjct 8649 TTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGA 8708 Query 54406 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 54465 ||| | ||| | ||| || || ||||| ||||| ||||| |||||||| | Sbjct 8709 AGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTA 8768 Query 54466 TTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCC 54525 ||| | || | |||||| || ||||| ||||| || || || || ||| |||||||| Sbjct 8769 TTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATTCC 8828 Query 54526 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAG 54585 || ||||||||||||| ||| || || || | || || || || | || | || Sbjct 8829 AACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGAGGCGAAG 8888 Query 54586 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 54645 | || ||| |||||| ||| || || |||||||| | ||| ||||||||| || || Sbjct 8889 AAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATCATA 8948 Query 54646 AATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAAC---TACATCCATGGTAATACT 54702 || || | || || || | | | | || || |||| | | | ||| | | || Sbjct 8949 AACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACATAGATTTGCT 9008 Query 54703 TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCAT 54762 || || ||||| |||||||||||| ||||| ||||| | | | ||| | Sbjct 9009 ---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGAGAC 9065 Query 54763 CACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGC 54822 |||| | ||| ||||||||||| |||||||||||| || || ||||| | || || Sbjct 9066 AACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGCTGC 9125 Query 54823 TAGAATGGCATAATCCGGATG 54843 ||||| || || || ||||| Sbjct 9126 AAGAATAGCGTAGTCGGGATG 9146 >seq3986 Length=15657 Score = 210 bits (232), Expect = 3e-49 Identities = 590/914 (65%), Gaps = 64/914 (7%) Strand=Plus/Plus Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890 ||| ||||| ||||| || ||||| || |||||||||||||| ||||| || || | Sbjct 6392 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 6451 Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCC 23950 || || ||||||||||||||||| ||||||| | || || || | | || || | | Sbjct 6452 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACT-TTGGAATTTC 6510 Query 23951 CAATTCAGAAATCAA-TCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAAT 24009 | | ||| || || |||||| || || || || || ||||||| | Sbjct 6511 CTAACGAGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 6570 Query 24010 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 24069 |||| || | || ||| || || |||| |||||||||||||| || ||| | Sbjct 6571 TCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGG 6630 Query 24070 CGTCTGTTATAATA----GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTA 24125 | | ||| |||| | || | |||| || || ||| | |||||| | Sbjct 6631 CTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTC----AAATGTGAA 6686 Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 || | | ||| || || || |||||| || ||||| | ||| | |||||| ||| Sbjct 6687 AAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAA 6746 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || || || || | ||| | || || || || | |||||| ||||| ||||| || ||| Sbjct 6747 AAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCA 6806 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAAC-CGGCGCT 24304 || || ||||| || ||||| ||||| || | ||| | || |||| | || | || Sbjct 6807 CTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCT 6866 Query 24305 --GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------- 24354 ||| || ||||| ||||| || | ||| || || | |||||| | Sbjct 6867 TTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAAT 6926 Query 24355 ----------------------------------------TTGTCTCTATAGCATTAAAG 24374 ||||||| |||||||| || Sbjct 6927 CGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAA 6986 Query 24375 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 24434 ||||| |||||| | |||||| | || ||||| || ||||| ||| |||| Sbjct 6987 AGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCA 7046 Query 24435 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 24494 || || || ||||| || ||||||||||| || || |||||||||| | |||||| Sbjct 7047 GAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGC 7106 Query 24495 ACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 24554 ||||| | | ||| || || | | |||||||| || || ||||| ||| |||||| Sbjct 7107 ACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAA 7166 Query 24555 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCA 24611 || || | ||||| |||||| ||| ||| || | | | ||||||||||| Sbjct 7167 AAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCG 7226 Query 24612 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 24671 | |||||||||||| | ||| | || || | |||||||| |||||||| || ||||| Sbjct 7227 TGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTG 7286 Query 24672 TACATATTCCAGAT 24685 ||||||| ||| || Sbjct 7287 TACATATGCCATAT 7300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593670651265200