Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1897 86.0 5e-12 >seq1897 Length=19642 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/175 (73%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCTCGAGCTGTTTTCC 118600 ||||| |||||||||||||||||||| | | || || || |||||| || ||||| || Sbjct 4641 GTAGATTCTTTTTGAATGTTGTAATCAGATAAT-GTTCGACCATCCTCAAGTTGTTTGCC 4699 Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGTT 118659 ||| |||| | | || |||||||| || || || ||||||| |||| ||||| || Sbjct 4700 AGCAAAGATTAATCTTTGTTGATCGGGTGGAATTCCTTCCTTGTCCTGT-ATTTTACTTT 4758 Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 | || | || | |||||| | ||| ||||| | ||| | ||||| || || Sbjct 4759 TCACATTATCAATGGTGTCGGATGACTCTACCTCAAGGGTAATGGTTTTACCAGT 4813 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| ||| || |||||||| ||||| || || | || || ||||| Sbjct 4905 ACCAAGTGGAGTGTCGATTCTTTTTGGATGTTATAGTCAGAAAGTGTTCGACCGTCCTCA 4964 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||||||||| | || || | || |||||||| || || || || |||||| Sbjct 4965 AGTTGTTTTCCAGCAAAAATTAGTCTTTGTTGATCGGGTGGAATTCCTTCTTTGTCTTGT 5024 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| ||| || | |||| |||||| | ||||||||| | || | ||||| Sbjct 5025 ATTTTACTTTTTACATTGTCGATGGTGTCAGACGACTCGACCTCTAGAGTGATGGTTTTT 5084 Query 118710 CCGGT 118714 || || Sbjct 5085 CCAGT 5089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433794102630580