Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq3986 143 3e-29 >seq3986 Length=15657 Score = 143 bits (158), Expect = 3e-29 Identities = 577/901 (64%), Gaps = 61/901 (7%) Strand=Plus/Plus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 |||||||| |||| |||| |||||| || |||||||| || || ||| || |||||| Sbjct 6405 TTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGCCAAAGAGATATTT 6464 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 14031 ||||| ||||||||||||||| ||||| | | ||||| | |||| | || Sbjct 6465 TCCATGAAATCAAATGGATTT-TTGACTTTGTATACTTTGGAATTTCCTAACGAGAGGAG 6523 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 | || ||| |||| ||| || || || || ||| | | ||||| || | ||| Sbjct 6524 AAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGTTCATGCCGAGTAG 6583 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 || | | |||| |||||||| |||||| || || | | |||| Sbjct 6584 AGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGCTTGTGTGATAAC 6643 Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 14211 | | || | | ||||| || | || | |||| ||| | | ||| ||||| Sbjct 6644 ATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAGAGGAGACAAGCAAA 6703 Query 14212 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 14271 || || ||||| || || | |||||||||||| ||||| |||| || | ||| Sbjct 6704 GTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGGTTAGGCCAGCCAT 6763 Query 14272 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 14331 ||| |||||||| || |||||||| || | ||| || || || || ||||||||||| Sbjct 6764 CAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGAAAAATATTCCCTC 6823 Query 14332 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATT 14390 ||||||||||| |||| | |||| |||||| | | | ||||| | || ||||| Sbjct 6824 CACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTTTGTCTTGA-ATCCAAC 6882 Query 14391 TTCTAGCCCATTCAGAtttttttttAATAAAA--TCCATTGTTTCAATAGC-ATTAA--- 14444 ||||| ||||| ||||| |||||| || | | || || || | |||| Sbjct 6883 GGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATCGTTAACGATTATCGC 6942 Query 14445 -ATA--------AATG----TTCCTTCTCTT--TAGTA---------------------- 14467 ||| |||| || ||| ||| ||| | Sbjct 6943 GATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAAGATAAGTTTTTTGAG 7002 Query 14468 CTTGAA-----ATGTATGTATCAATAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCC 14521 ||||| ||||| ||||| || | |||| | || |||||||||| || |||||| Sbjct 7003 CTTGATCTTTTATGTAAGTATCGATTAA-AAGCGAATAAGTTTCAGAGTGGATATTTTCC 7061 Query 14522 ATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAAT 14581 || || ||||| |||||||| ||||||| || | || || || | ||| Sbjct 7062 ATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCACTTCACTGCTAAAC 7121 Query 14582 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCA--ATATGT 14639 | ||| | | ||||||||||| || || || || |||||||| || | | ||| Sbjct 7122 CGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAAAGGCTAGCACATGA 7181 Query 14640 TTTTAATAAAGTATTGCTCTTCATTGCTGA---GTTTTTTCCAATCGGCTAAATCCTTAG 14696 | ||||||||| | || |||| ||| | || ||||||||| | ||| |||| Sbjct 7182 GAT--ATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGTGGATATCTTTAG 7239 Query 14697 AAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATA 14756 | | ||| | || ||| | ||||||||| || | |||||||| ||||| ||||| Sbjct 7240 ACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGTACATATGCCATA 7299 Query 14757 T 14757 | Sbjct 7300 T 7300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482304208718200