Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3899 96.9 7e-15 >seq3899 Length=18170 Score = 96.9 bits (106), Expect = 7e-15 Identities = 168/240 (70%), Gaps = 16/240 (7%) Strand=Plus/Minus Query 35388 GAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAAT 35447 |||| | |||||| |||| || |||| ||||| || ||||| |||||||| ||||||| Sbjct 4163 GAGCTGTGGGAGACCTGGGGCCTATATATGGATTTCAGTGGCGACATTTTGGCGCTGAAT 4104 Query 35448 A---TGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCA----ATTGGCCAAT 35500 | |||| | | | | ||||| || || || ||| ||||||| | || | Sbjct 4103 ACGTTGATGC---TACAACAGATTACACAGGGAAAGGTGTTGATCAGCTCAATGATGTAA 4047 Query 35501 ATACTAAAGACCCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAA 35559 ||||||| ||| ||| |||||| ||||| || | || ||| | || || ||||| Sbjct 4046 TTACTAAAT----TGA-AGACAAATCCCTATGATCGACGCATTATTCTTACTGCCTGGAA 3992 Query 35560 TCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 ||| | ||||| | || |||||| | || || |||||||| || ||||||||||| Sbjct 3991 TCCGAGTGATCTCAAGCTGATGGCTTTGCCGCCTTGCCACATTCTAGCCCAATTTTATGT 3932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989496958356075