Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq2201 105 7e-18 seq1897 86.0 6e-12 seq574 84.2 2e-11 >seq2201 Length=24903 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||||| |||||||| ||||| || || || ||| | ||| ||||| ||| Sbjct 11279 TGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAATGTCCGGCCGTCCTCGAGTTGT 11220 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || ||| | |||| |||||| || || || || |||||||| || || ||||||| Sbjct 11219 TTTCCCGCAAAAATCAAACGTTGTTGGTCAGGTGGAATGCCTTCCTTATCTTGGATTTTT 11160 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 ||||| | || | ||||| | | ||||||||||| || | || || || || Sbjct 11159 GATTTTACATTGTCGATGGTGTCCGATGACTCCACCTCAAGCGTAATAGTTTTACCCGTG 11100 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||| ||||| |||||||| Sbjct 11099 AGGGTTTTCACGAAAATTTGCAT 11077 >seq1897 Length=19642 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/190 (71%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||||| |||| ||||| |||||||||||||| |||| | Sbjct 4611 CCACCACGAAGACGGAGAACTAGATGAAGGGTAGATTCTTTTTGAATGTTGTAAT--CAG 4668 Query 139598 ATTGTGCTCGA--GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 || || |||| || || || ||||| |||||| |||| | | ||| |||||||| | Sbjct 4669 ATAATGTTCGACCATCCTCAAGTTGTTTGCCAGCAAAGATTAATCTTTGTTGATCGGGTG 4728 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | || ||||| ||||| ||||| ||| | | || | ||||||| | ||| | Sbjct 4729 GAATTCCTTCCTTGTCCTGTATTTTACTTTTCACATTATCAATGGTGTCGGATGACTCTA 4788 Query 139716 CCTCAACGGT 139725 |||||| ||| Sbjct 4789 CCTCAAGGGT 4798 >seq574 Length=26839 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||||||||||||| | |||| |||||| ||||| || || || || ||||| Sbjct 3150 TCTTCAAGCTGTTTACCAGCAAATATCAAACGTTGTTGATCAGGGGGGATTCCCTCTTTA 3209 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| ||| ||| | | || | |||||| | || ||| ||||| | ||| | Sbjct 3210 TCCTGGATCTTTGCTTTCACATTATCAATTGTGTCAGAGGACTCAACCTCTAAGGTGATA 3269 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAA 139755 || ||||| || | || || ||||| Sbjct 3270 GTTTTGCCAGTTAGGGTCTTGACGAA 3295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496021431508000