Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2084 565 4e-156 seq3986 214 3e-50 >seq2084 Length=12802 Score = 565 bits (626), Expect = 4e-156 Identities = 1374/2062 (67%), Gaps = 43/2062 (2%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| ||||| ||||| ||||| | | |||||||| |||||||| || ||||||| Sbjct 7102 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCAGTTTTTAAG 7161 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || | ||||||| ||||||||||| |||| |||| | | || ||| | Sbjct 7162 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 7221 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || |||||||| || || ||||| || || || || | || |||||||| | || Sbjct 7222 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 7281 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || || |||| || ||||||| ||||| || | | ||||| || |||||| Sbjct 7282 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 7341 Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 |||| |||||||||| || || ||||| | || || | ||| || || | ||| | Sbjct 7342 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 7401 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 ||||| | || | | || | || | ||||| || | |||||| ||||| Sbjct 7402 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 7461 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 | || || | || | ||| |||||| ||||||||| || | | |||||| ||| Sbjct 7462 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 7521 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194 | ||||||| || ||| |||||||| || || || | ||| ||||| | ||| || Sbjct 7522 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 7581 Query 79195 TATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTC 79254 || || |||| | | |||| ||| ||||||||||| | || | || ||| | Sbjct 7582 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 7641 Query 79255 CAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGT 79314 || | ||| ||||| || ||| | ||| || || ||| || || || | Sbjct 7642 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 7701 Query 79315 CCTTCCTTTTCGGCTAATTCACAACTC--GCCTCTAATGCTCCGTAATAAATGGTTTCGA 79372 ||| |||| |||||| ||| ||| | || ||| | | ||| |||||||| | Sbjct 7702 CCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 7759 Query 79373 AAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAA 79432 | |||| || ||||||| || ||| ||| | || ||||| | || | || Sbjct 7760 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 7819 Query 79433 ACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTT 79492 || | ||||||| |||||||| || | | | || |||| || | ||| | || Sbjct 7820 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATT-GCTCTTA 7878 Query 79493 C-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATT 79551 | |||||| || | |||||| ||||||| ||| || |||||||| |||||||| |||| Sbjct 7879 CGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACA 7938 Query 79552 ACTTTGACC-ACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC-----TATTA-CAAA 79604 || | ||| ||||| | |||||| |||||||||| ||| ||||| || | Sbjct 7939 ACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATA 7997 Query 79605 CATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTG 79664 | ||| || | ||||||| ||||||||| || || |||| | | | |||| Sbjct 7998 GGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTC 8057 Query 79665 TATTATTTCAGTGCAGAGGTTA---CTACACTTAATGGTTCCTAAATTTTGTTGATTACT 79721 | ||||| || || || ||| |||| || || || | ||||| |||||| || Sbjct 8058 AACAATTTCGGTACAAAGATTAGAGCTACGGATA---GTCCCGAGATTTTTTTGATTGCT 8114 Query 79722 CTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTC 79781 |||||| ||||| ||||| || || || || || || ||||||||||| | || | ||| Sbjct 8115 CTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTC 8174 Query 79782 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTT-- 79839 || || | | ||| | | | ||| || |||| || || | |||| ||| Sbjct 8175 GATTATTGAGTACCATAGCTTTTGTGCC---ATAATAG--TTCTACGGCCTTTCCCTTCT 8229 Query 79840 ---TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGA 79896 || || | | |||||| || || || || || | ||||| ||| |||||| Sbjct 8230 TGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATCAGCTAGACCAGGA 8289 Query 79897 CATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGA 79956 ||||| ||| ||||||| | ||| || |||| | | |||| |||||||||||| Sbjct 8290 CATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGA 8349 Query 79957 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATT 80015 ||||| |||||||| || ||| |||||||| | | | | || || || || ||| Sbjct 8350 TCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATT 8408 Query 80016 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 80075 || || ||||||||| | | ||||| | ||||| || ||||| ||||| || | Sbjct 8409 TTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAA 8468 Query 80076 AACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 80135 ||||||| || || || || || ||||| | ||||| || || ||||| | |||| Sbjct 8469 TGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCG 8528 Query 80136 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGC 80195 | ||| || | ||||||||| || | ||||| || || | |||||| || | || Sbjct 8529 GAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGC 8588 Query 80196 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 80255 ||||| | ||| || || || || || || ||||||| || | ||||| Sbjct 8589 GCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGT 8648 Query 80256 TTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCT 80315 ||| || ||||| ||||| || || || ||||| || |||| | || || ||| || Sbjct 8649 TTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGA 8708 Query 80316 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 80375 ||| | ||| | ||| || || ||||| ||||| ||||| |||||||| | Sbjct 8709 AGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTA 8768 Query 80376 TTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCC 80435 ||| | |||| |||||| || ||||| ||||| ||||| || || ||| |||||||| Sbjct 8769 TTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATTCC 8828 Query 80436 TACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAA 80495 || ||||||||||||| ||| || || || | || || || || | ||| | || Sbjct 8829 AACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGA-GGCGAA 8887 Query 80496 CAAG-TAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 80554 ||| || ||| |||||| ||| || || |||||||| | ||| ||||||||| || | Sbjct 8888 GAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATCAT 8947 Query 80555 AAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC---TACATCCATGGTGATAC 80611 ||| || | || || || | | | | || || |||| | | | ||| | | | Sbjct 8948 AAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACATAGATTTGC 9007 Query 80612 TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCA 80671 | || || ||||| |||||||||||| ||||| ||||| | | | | ||| | Sbjct 9008 T---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGAGA 9064 Query 80672 TCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGG 80731 |||| | ||| ||||||||||| ||||||||||| || || ||||| | || | Sbjct 9065 CAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGCTG 9124 Query 80732 CTAAAATGGCATAATCTGGATG 80753 | | ||| || || || ||||| Sbjct 9125 CAAGAATAGCGTAGTCGGGATG 9146 >seq3986 Length=15657 Score = 214 bits (236), Expect = 3e-50 Identities = 589/910 (65%), Gaps = 56/910 (6%) Strand=Plus/Plus Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715 ||| ||||| ||||| || ||||| || |||||||||||||| ||||| || || | Sbjct 6392 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 6451 Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775 ||| || |||||||||||||||||||| ||||| | || || || | ||| | ||| Sbjct 6452 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 6511 Query 49776 CAATTCAGAAATCAA-TCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 49834 || ||| || || ||| || || ||||| || || ||||||| | Sbjct 6512 TAACG-AGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 6570 Query 49835 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 49894 |||| || | || ||| || || |||| |||||||||||||| || || | Sbjct 6571 TCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGG 6630 Query 49895 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 49954 | | ||| |||| | ||| | | | | ||| ||| |||||| ||| | Sbjct 6631 CTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAGA 6690 Query 49955 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 50014 | ||| || || || ||| || || ||||| | ||| |||||||| ||||| | Sbjct 6691 GGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGG 6750 Query 50015 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAA 50074 | || || | ||| | || || || || | |||||| ||||| ||||| || ||| | Sbjct 6751 TTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGA 6810 Query 50075 AGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGT 50131 | || ||||| || ||||| ||||| || ||||| | | |||| | | | | ||| Sbjct 6811 AAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTTTGT 6870 Query 50132 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------TCGTT 50184 | || ||||| ||||| || | ||| || || | |||||| | ||||| Sbjct 6871 CTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATCGTT 6930 Query 50185 -----------------------------------------TCTATGGCATTAAAGAGAT 50203 || || ||||| || |||| Sbjct 6931 AACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAAGAT 6990 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 | |||||| | |||||| | ||||||||||| ||||| ||| |||| || | Sbjct 6991 AAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCAGAGT 7050 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 | || ||||| || || |||||||| || || |||||||||| | ||||||||||| Sbjct 7051 GGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCACTT 7110 Query 50324 CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 50383 | | | ||| || || | | |||||||| || || ||||| ||| |||||||| | Sbjct 7111 CACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAAAGG 7170 Query 50384 CCAATACATGTTTTATAAAATGTTTTTCGT--TGGGTGTTA-GTTTATTCCAATCATTGA 50440 | | ||||| |||||| | | ||| | | || | | ||||||||||| | || Sbjct 7171 CTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGTGGA 7230 Query 50441 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 50500 |||||||||| | ||| | || || | |||||||| |||||||| || ||||| |||| Sbjct 7231 TATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGTACA 7290 Query 50501 TATTCCAGAT 50510 ||| ||| || Sbjct 7291 TATGCCATAT 7300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718207163558600