Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq2084 569 3e-157 seq3986 183 4e-41 >seq2084 Length=12802 Score = 569 bits (630), Expect = 3e-157 Identities = 1381/2075 (67%), Gaps = 43/2075 (2%) Strand=Plus/Plus Query 70788 TTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACAT 70847 ||| | ||| | || |||||||| |||| ||||| || | |||||||| |||||||| Sbjct 7089 TTCTTGGTCAACGGTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACAT 7148 Query 70848 GCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGC 70906 ||| ||||||| || | ||||||| |||||||||||| |||| |||| |||| Sbjct 7149 GCCAGTTTTTAAGCCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGT 7208 Query 70907 TAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTG 70966 | || || | |||||||||||| ||||| ||||| || || || || | || | Sbjct 7209 TGGG-TCTTTCAAGTGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAG 7267 Query 70967 CAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAA 71026 ||||||| | || || || |||| || ||||||| ||||| || | | |||| Sbjct 7268 CAGCCATCTGAATTATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAA 7327 Query 71027 TATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTT 71083 | || |||||| |||| |||||||||| || || ||||| | || || | ||||| Sbjct 7328 TTTCGGCTGGAATATTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTT 7387 Query 71084 TGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTA 71143 | || | ||| |||||| | || | | || | || | ||||| || | Sbjct 7388 TCATGTTATCAGACCATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAA 7447 Query 71144 CTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTG 71203 |||||| ||||| | || || | || | ||| |||||| |||||| || || | Sbjct 7448 TTTGAAACTCTCCTGCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAAC 7507 Query 71204 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGAC 71263 |||||||| ||| | ||||||| || ||| || ||||| || || || | || | Sbjct 7508 ACTCATTAAATCCAAGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGC 7567 Query 71264 TATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCG 71323 |||| | ||| |||| | |||| | | |||| ||| ||||||| ||| | || | Sbjct 7568 TATTCCGAAGGCCATAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTG 7627 Query 71324 ATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCAT 71383 ||| ||| || | ||| || || | | Sbjct 7628 TAGGTGTAACGCCCCACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGT 7687 Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTC--GCCTCTAATGCTCCATA 71441 | || ||||||| ||| ||||| ||||| ||| ||| | || ||| ||| Sbjct 7688 AAGTCTCGTATGTACCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATG 7745 Query 71442 ATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATA 71501 ||| |||||||| || |||| || ||||||| || ||| || || || ||||| | Sbjct 7746 ATATATGGTTTCAAAGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAA 7805 Query 71502 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCT 71561 || | |||| | ||||||| |||||||| || | | | || |||| ||| | Sbjct 7806 GCGCAAAGCCAAAAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCG 7865 Query 71562 CTTATTAGAAATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGA 71620 ||| | || | |||||| || | |||||| ||||||| ||| || |||||||| | Sbjct 7866 TAAATT-GCTCTTACGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCA 7924 Query 71621 GATTTCTGACTATTACTTTGACC-ACATCCTTTAGTTTGAGAAAATCAAATCTCCCATC- 71678 |||| || |||| || | ||| ||||| | |||||| |||||||||| | ||| Sbjct 7925 GATTCCTAACTACAACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCA 7983 Query 71679 ----TATTACAAACACGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATT 71732 ||||| | | | || ||| || | ||||||| ||||||||| || || |||| Sbjct 7984 GCTGTATTA-ACATAGGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATC 8042 Query 71733 AGCATCGGCATATTGTATAATTTCAGTGCAAAGATTA---CTACACTTGATGGTTCCTAA 71789 | | | |||| | |||||| || ||||||||| |||| ||| || || | Sbjct 8043 CGGAGATGAGTATTCAACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAG 8099 Query 71790 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGT 71849 ||||| |||||| |||||||| ||||| ||||| || || || ||||| || |||||||| Sbjct 8100 ATTTTTTTGATTGCTCTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGT 8159 Query 71850 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-TTCTT-- 71906 ||| | || | ||| || || | | ||| | | | ||| || ||| |||| Sbjct 8160 TTCTGTTTGTGCTTCGATTATTGAGTACCATAGCTTTTGTGCC---ATAATAGTTCTACG 8216 Query 71907 GTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATT 71966 | | || |||| ||| || | | |||||| || || || || || | ||| Sbjct 8217 GCCTTTCCCTTCTTGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATC 8276 Query 71967 GTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCG 72026 ||| |||||||||||| || ||||||| | ||| || |||| | | |||| Sbjct 8277 AGCTAGACCAGGACATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCT 8336 Query 72027 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCT 72085 ||||||||||||||||| |||||||| || ||| |||||||| | | | | || | Sbjct 8337 CTTCATAAAGAGATCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTT 8395 Query 72086 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 72145 | || || ||| || || ||||||||| | | ||||| | ||||| || |||| Sbjct 8396 CTTTGCCGTGATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCA 8455 Query 72146 AGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 72205 | ||||| || | ||||||| || || || || || ||||| | ||||| || || | Sbjct 8456 AATATATAGCGAATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTAT 8515 Query 72206 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 72265 |||| | |||| | ||| || | ||||||||| || ||||| || || | ||||| Sbjct 8516 TATTGAAGACTCGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATAT 8575 Query 72266 AGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 72325 | || | || ||||| ||| || || || || || || ||||||| | Sbjct 8576 AAGCACCTGTCGCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAA 8635 Query 72326 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 72385 | | ||||| ||| || ||||| ||||| || || |||||||| || |||| | || Sbjct 8636 TCATAGCGCAAGTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAA 8695 Query 72386 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 72445 || ||| || ||| | ||| | ||| || || ||||| ||||| |||| Sbjct 8696 TTAAAAAGCATGAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAG 8755 Query 72446 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCC 72505 | |||||||| |||| | |||| |||||| || ||||| ||||| ||||| || || Sbjct 8756 CATGCGTAAAGTATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCAT 8815 Query 72506 ATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGT 72565 ||| || ||||| || ||||||||||||| |||||| || || | || || || || | Sbjct 8816 CTTGGTGAATTCCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTAT 8875 Query 72566 TATTTATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 72624 ||| | || ||| || ||| |||||| ||| || || |||||||| | ||| | Sbjct 8876 CATTGA-GGCGAAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTA 8934 Query 72625 AAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATC- 72683 |||||||| || |||| || | ||||| || | | | | || || |||| | || Sbjct 8935 AAGTCTCGATCATAAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCG 8994 Query 72684 --CATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 72741 ||| | | || || || ||||| |||||||||||| ||||| ||||| | | Sbjct 8995 TACATAGATTTGCT---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGG 9051 Query 72742 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACG 72801 | | ||| | |||| | ||| ||||||||||| ||||||||||| || || Sbjct 9052 TAGAGATCAGAGACAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACA 9111 Query 72802 GCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 ||||| | || || ||||| || || || ||||| Sbjct 9112 GCTATGCGTGCTGCAAGAATAGCGTAGTCGGGATG 9146 >seq3986 Length=15657 Score = 183 bits (202), Expect = 4e-41 Identities = 586/914 (64%), Gaps = 64/914 (7%) Strand=Plus/Plus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 ||| ||||| ||||| || ||||| || |||||||||||||| |||||||| || | Sbjct 6392 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 6451 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880 ||| || |||||||||||||||||||| ||||| | || || || | ||| | ||| Sbjct 6452 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 6511 Query 41881 CAATTCAGAAATCAA-TCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939 || ||| || || |||||| | |||||| || || ||||||| | Sbjct 6512 TAACG-AGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 6570 Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999 |||| || | || ||| || || |||| |||||||||||||| || ||| | Sbjct 6571 TCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGG 6630 Query 42000 CGTCTGTTATAATA----GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTA 42055 | | ||| |||| | || | |||| || || ||| | |||||| | Sbjct 6631 CTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTC----AAATGTGAA 6686 Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 || | | ||| || || || ||| || || || || | ||| | |||||| ||| Sbjct 6687 AAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAA 6746 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || || || || | ||| | || || || || | |||||| || || ||||| || ||| Sbjct 6747 AAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCA 6806 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCACT 42234 || || ||||| || ||||| ||||| || | ||| | | |||| | || | || Sbjct 6807 CTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCT 6866 Query 42235 --GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------T 42285 ||| || ||||| ||||| || | ||| || || | |||||| | | Sbjct 6867 TTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAAT 6926 Query 42286 CGTT-----------------------------------------TCTATGGCATTAAAG 42304 |||| || || ||||| || Sbjct 6927 CGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAA 6986 Query 42305 AGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCT 42364 ||||| |||||| | |||||| | || |||||||| ||||| ||| |||| Sbjct 6987 AGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCA 7046 Query 42365 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGT 42424 || || || ||||| || || |||||||| || || |||| ||||| | || ||| Sbjct 7047 GAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGC 7106 Query 42425 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAA 42484 ||||| | | ||| || || | | ||||| || || || ||||| ||| |||||| Sbjct 7107 ACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAA 7166 Query 42485 AACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTAAT-TTATTCCAATCA 42541 || || | ||||| |||||| ||| ||| || | || | ||||||||||| Sbjct 7167 AAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCG 7226 Query 42542 TTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTA 42601 | |||||||||||| | ||| | || || | |||||||| ||||| || || ||||| Sbjct 7227 TGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTG 7286 Query 42602 TACATATTCCAGAT 42615 ||||||| ||| || Sbjct 7287 TACATATGCCATAT 7300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671081607867400