Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1897 107 2e-18 >seq1897 Length=19642 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||| ||||| | ||| ||||||||||| | ||| |||||| | | ||| ||| || Sbjct 4115 CACTAAGTGGAGAGTCGATTCCTTTTGTATGTTGTAATCGTTAAGAGTACGTCCATCTTC 4174 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || || ||||| ||||||| |||||||| || || || |||||||||||||| || | Sbjct 4175 AAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGGTGGAATACCTTCTTTATCTTG 4234 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || |||||| | | | || || | || || |||| || || ||||| Sbjct 4235 GATCTTACTTTTGACGTTGTCTATTGTATCTGAAGATTCTACTTCAAGAGTTATTGTTTT 4294 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||| | ||||| ||||| |||||||||| Sbjct 4295 CCCAGTCAATGTTTTGACAAATATCTGCATGC 4326 Score = 107 bits (118), Expect = 2e-18 Identities = 137/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 |||||||| | || ||||| ||||| | |||||| || | |||||| || |||| Sbjct 4905 ACCAAGTGGAGTGTCGATTCTTTTTGGATGTTATAGTCAG--AAAGTGTTCGACCGTCCT 4962 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || |||||||| |||| |||| |||||| ||||| || ||||| ||||||||||| | Sbjct 4963 CAAGTTGTTTTCCAGCAAAAATTAGTCTTTGTTGATCGGGTGGAATTCCTTCTTTGTCTT 5022 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||||| || || | ||| ||||||| ||||| || | |||||||||| Sbjct 5023 GTATTTTACTTTTTACATTGTCGATGGTGTCAGACGACTCGACCTCTAGAGTGATGGTTT 5082 Query 94977 TTCCAGT 94983 ||||||| Sbjct 5083 TTCCAGT 5089 Score = 89.7 bits (98), Expect = 5e-13 Identities = 90/115 (78%), Gaps = 4/115 (3%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868 |||||||| ||||| | ||| ||||| ||| |||| || |||||| || ||||| | Sbjct 4641 GTAGATTCTTTTTGAATGTTGTAATCAG--ATAATGTTCGACCATCCTCAAGTTGTTTGC 4698 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 | |||||||||||||||| ||||| || ||||| ||||| ||||| | ||||| Sbjct 4699 CAGCAAAGATTAATCTTTGTTGATCGGGTGGAATTCCTTCCTTGTCCTGTATTTT 4753 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 || ||||| | ||| ||||| ||||| | || || ||| | |||||| | ||||| Sbjct 5183 ACTAAGTGAAGAGTGGATTCTTTTTGTATATTGTAGTCGG--AAAGTGTTCGGCCATCCT 5240 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| ||| ||||| | || || ||||| || || ||||| || || ||||||||||| | Sbjct 5241 CCAACTGCTTTCCAGCGAAAATCAATCTCTGTTGGTCTGGTGGGATGCCTTCTTTGTCCT 5300 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 |||||| || || | ||| ||| |||| ||||| |||| || || |||| Sbjct 5301 GAATTTTGCTTTTTACATTGTCGATAGTATCAGATGATTCGACTTCAAGGGTTATAGTTT 5360 Query 94977 TTCCAGTAA 94985 | ||||||| Sbjct 5361 TGCCAGTAA 5369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448252731011400