Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq3986 86.0 7e-12 >seq3986 Length=15657 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 |||||||| |||| |||| |||||||||||| || ||||| || |||| || ||| | Sbjct 6405 TTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGCCAAAGAGATATTT 6464 Query 21245 TCCATAAAATCAAATGGATTTT 21266 ||||| |||||||||||||||| Sbjct 6465 TCCATGAAATCAAATGGATTTT 6486 Score = 82.4 bits (90), Expect = 8e-11 Identities = 174/259 (67%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 21774 TTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAAC 21833 ||||||| || |||||||| ||| || |||||||| ||||| |||| ||||| | | Sbjct 7042 TTTCAGAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAA 7101 Query 21834 ATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGG 21893 || || || ||| || | | | ||||||||| || || || || ||||| Sbjct 7102 TCTGCACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGG 7161 Query 21894 CAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTA---ATTTTTTCC 21950 ||||||| || | | || |||||| |||||||| | ||| | | || |||| Sbjct 7162 CAAAAAAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCC 7221 Query 21951 AATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCT 22010 |||| | |||||| || ||||| | || |||| |||||||| || || | Sbjct 7222 AATCGTGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTT 7281 Query 22011 TTTTATACATAATCCAGAT 22029 |||| |||||| ||| || Sbjct 7282 TTTTGTACATATGCCATAT 7300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531855156262600