Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1897 98.7 9e-16 >seq1897 Length=19642 Score = 98.7 bits (108), Expect = 9e-16 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||| ||| | |||||| | || || ||| | ||||||||| || | || ||| Sbjct 4813 ACTGGTAAAACCATTACCCTTGAGGTAGAGTCATCCGACACCATTGATAATGTGAAAAGT 4754 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 || || ||||| ||||| || || ||||||||||| ||| | || | | ||||| Sbjct 4753 AAAATACAGGACAAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAAA 4694 Query 24135 CAACTCGAAGATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAATTCA 24193 ||||| || |||| ||| | | | | ||||| |||||||||||||||||||| |||| Sbjct 4693 CAACTTGAGGATGGTCGAA-CATTATCTGATTACAACATTCAAAAAGAATCTACCCTTCA 4635 Query 24194 TTTAGT 24199 | |||| Sbjct 4634 TCTAGT 4629 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 24007 AAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAG 24066 ||| | | || || ||| | ||||| ||||||||||| | |||||||| || | | Sbjct 4536 AAATAGTTACCGGTAAAACTATTACTCTCGAAGTCGAGTCTTCTGACACCATTGATAACG 4477 Query 24067 TCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACG 24126 ||||| || ||| || |||||||| || ||||| || |||||| || | || | | Sbjct 4476 TCAAAAGCAAAATTCAAGATAAAGAAGGAATTCCTCCGGACCAACAGCGATTAATATTTG 4417 Query 24127 GCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCT 24185 || || ||||| || |||| | ||| | | | | || || ||||| || |||||||| Sbjct 4416 CAGGAAAACAACTTGAGGATGGCCGAA-CTTTATCAGACTACAACATCCAGAAAGAATCC 4358 Query 24186 ACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||| | | | |||||||| Sbjct 4357 ACTCTTCATTTAGTGCTTCGTCTAAGAGGAGG 4326 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||| ||| | || ||| | |||||||| | || || ||||| | || ||| Sbjct 5367 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCTGATACTATCGACAATGTAAAAAGC 5308 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 || ||| |||||||||||||| || || || ||||||||| |||||| || || ||| Sbjct 5307 AAAATTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAAAG 5248 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 || | || |||| | ||| | ||| || || || ||||||||||| || |||| Sbjct 5247 CAGTTGGAGGATGGCCGAACACTTTCCGACTACAATATACAAAAAGAATCCACTCTTCAC 5188 Query 24195 TTAGT 24199 ||||| Sbjct 5187 TTAGT 5183 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||||||| | || || | || |||||| | ||||||||||| | || ||| Sbjct 5089 ACTGGAAAAACCATCACTCTAGAGGTCGAGTCGTCTGACACCATCGACAATGTAAAAAGT 5030 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 || || ||||||||||| || || ||||||||||| ||||| |||| | || || Sbjct 5029 AAAATACAAGACAAAGAAGGAATTCCACCCGATCAACAAAGACTAATTTTTGCTGGAAAA 4970 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 ||||| || || | ||| | || |||||||| ||||||||||| ||| | || Sbjct 4969 CAACTTGAGGACGGTCGAACACTTTCTGACTATAACATCCAAAAAGAATCGACACTCCAC 4910 Query 24195 TTAGT 24199 || || Sbjct 4909 TTGGT 4905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429900028464075