Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2084 517 1e-141 seq3986 219 5e-52 >seq2084 Length=12802 Score = 517 bits (572), Expect = 1e-141 Identities = 1362/2062 (66%), Gaps = 43/2062 (2%) Strand=Plus/Plus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 ||||| ||||| ||||| ||||| | | |||||||| |||||||| || ||||||| Sbjct 7102 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCAGTTTTTAAG 7161 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969 || | ||||||| |||||||||||| |||| |||| | | || ||| | Sbjct 7162 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 7221 Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029 || |||||||| || || ||||| || || || || | || |||||||| | || Sbjct 7222 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 7281 Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089 || || |||| || ||||||| ||||| || | | ||||| || |||||| Sbjct 7282 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 7341 Query 62090 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146 |||| |||||||||| || || ||||| | || || | ||| || || | |||| | Sbjct 7342 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 7401 Query 62147 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62206 ||||| | || | | || | || | ||||| || | |||||| ||||| Sbjct 7402 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 7461 Query 62207 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 62266 | || || | || | ||| |||||| |||||| || || | | |||||||| ||| Sbjct 7462 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 7521 Query 62267 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62326 | ||||||| || ||| || ||||| || || || | ||| ||||| | ||| || Sbjct 7522 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 7581 Query 62327 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 62386 || | || |||| | | |||| || ||||||| ||| | || | ||| ||| Sbjct 7582 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 7641 Query 62387 NNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGT 62446 ||| || ||| | |||| || || | || || ||||||| Sbjct 7642 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 7701 Query 62447 CCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAATGGTTTCGA 62504 ||| || | |||| ||| ||| | || || | | ||| |||||||| | Sbjct 7702 CCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 7759 Query 62505 AGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAA 62564 |||||| || || |||| || || || | || ||||| | || | || Sbjct 7760 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 7819 Query 62565 ACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTT 62624 || | ||||||| |||||||| || | | | || |||| || | ||| | || Sbjct 7820 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATT-GCTCTTA 7878 Query 62625 C-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATT 62683 | |||||| || | |||||| ||||||| ||| || |||||||| ||||| || || | Sbjct 7879 CGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACA 7938 Query 62684 ACTTTGACC-ACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC-----TATTA-CAAA 62736 || | ||| ||||| | |||||| |||||||||| ||| ||||| || | Sbjct 7939 ACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATA 7997 Query 62737 CATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTG 62796 | ||| || | ||||||| ||||||||| || || |||| | | | |||| Sbjct 7998 GGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTC 8057 Query 62797 TATTATCTCAGTGCAAAGATTA---CTACACTTGATGGTTCCTAAATTTTGTTGATTACT 62853 | || || || ||||||||| |||| ||| || || | ||||| |||||| || Sbjct 8058 AACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTGCT 8114 Query 62854 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 62913 |||||| ||||| ||||| || || || || || || ||||||||||| | || | ||| Sbjct 8115 CTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTC 8174 Query 62914 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT-T 62972 || || | | ||| | | | ||| || |||| || || | |||| ||| | Sbjct 8175 GATTATTGAGTACCATAGCTTTTGTGCC---ATAATAG--TTCTACGGCCTTTCCCTTCT 8229 Query 62973 CGT--ATAGTGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGA 63028 || ||| | | ||| || || || || || || | |||| | || |||||| Sbjct 8230 TGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATCAGCTAGACCAGGA 8289 Query 63029 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63088 |||||| || ||||||| | ||| || || | | | |||| |||||||||||| Sbjct 8290 CATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGA 8349 Query 63089 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 63147 ||||| |||||||| || ||| |||||||| | | | | ||| || || || ||| Sbjct 8350 TCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATT 8408 Query 63148 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63207 || || ||||||||| | | ||||| | ||||| || ||||| ||||| || | Sbjct 8409 TTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAA 8468 Query 63208 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63267 |||| || || || || || || ||||| | ||||| || || ||||| | |||| Sbjct 8469 TGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCG 8528 Query 63268 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGC 63327 | ||| || | ||||||||| || | ||||| || |||| |||||| || | || Sbjct 8529 GAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGC 8588 Query 63328 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 63387 ||||| | ||| || || || || || || ||||||| || | ||||| Sbjct 8589 GCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGT 8648 Query 63388 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 63447 ||| || ||||| ||||| || || |||||||| || |||| | || || ||| || Sbjct 8649 TTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGA 8708 Query 63448 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCA 63507 ||| | ||| | ||| || || ||||| ||||| ||||| || ||||| | Sbjct 8709 AGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTA 8768 Query 63508 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 63567 ||| | || | |||||| || ||||| ||||| || || || || ||| |||||||| Sbjct 8769 TTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATTCC 8828 Query 63568 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAA 63627 || ||||||||||||| ||| || || || | || || || || | || | || Sbjct 8829 AACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGA-GGCGAA 8887 Query 63628 CAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 63686 ||| || ||| |||||| ||| || || |||||||| | ||| ||||||||| || | Sbjct 8888 GAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATCAT 8947 Query 63687 AAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC---TACATCCATGGTAATAC 63743 ||| || | || || || | | | | || || |||| | | | ||| | | | Sbjct 8948 AAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACATAGATTTGC 9007 Query 63744 TTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCA 63803 | || || ||| | |||||||||||| ||||| ||||| | | | | ||| | Sbjct 9008 T---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGAGA 9064 Query 63804 TCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGG 63863 |||| | ||| ||||||||||| |||||||||||| || || ||||| | || | Sbjct 9065 CAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGCTG 9124 Query 63864 CTAGAATGGCATAATCCGGATG 63885 | ||||| || || || ||||| Sbjct 9125 CAAGAATAGCGTAGTCGGGATG 9146 >seq3986 Length=15657 Score = 219 bits (242), Expect = 5e-52 Identities = 592/914 (65%), Gaps = 64/914 (7%) Strand=Plus/Plus Query 32357 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 32416 ||| ||||| ||||| || ||||| || |||||||||||||| ||||| || || | Sbjct 6392 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 6451 Query 32417 TAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCC 32476 || || ||||||||||||||||| |||||||| | || || || | ||| | ||| Sbjct 6452 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 6511 Query 32477 CAATTCAGAAATCAA-TCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 32535 || ||| || || |||||| || ||||| || || ||||||| | Sbjct 6512 TAACG-AGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 6570 Query 32536 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 32595 |||| || | || ||| || || |||| |||||||||||||| || ||| | Sbjct 6571 TCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGG 6630 Query 32596 CGTCTGTTATAATA----GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTA 32651 | | ||| |||| | || | |||| || || ||| | |||||| | Sbjct 6631 CTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTC----AAATGTGAA 6686 Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 || | | ||| || || || |||||| || ||||| | ||| | |||||| ||| Sbjct 6687 AAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAA 6746 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || || || || | ||| | || || || || | |||||| ||||| ||||| || ||| Sbjct 6747 AAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCA 6806 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGCT 32830 || || ||||| || ||||| ||||| || | ||| | | |||| | || | || Sbjct 6807 CTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCT 6866 Query 32831 --GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------- 32880 ||| || ||||| ||||| || | ||| || || | |||||| | Sbjct 6867 TTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAAT 6926 Query 32881 ----------------------------------------TTGTCTCTATAGCATTAAAG 32900 ||||||| |||||||| || Sbjct 6927 CGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAA 6986 Query 32901 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 32960 ||||| |||||| | |||||| | || ||||| || ||||| ||| |||| Sbjct 6987 AGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCA 7046 Query 32961 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGT 33020 || || || ||||| || ||||||||||| || ||| |||||||||| | |||||| Sbjct 7047 GAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGC 7106 Query 33021 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 33080 ||||| | | ||| || || | | |||||||| || || ||||| ||| |||||| Sbjct 7107 ACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAA 7166 Query 33081 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCA 33137 || || | ||||| |||||| ||| ||| || | | | ||||||||||| Sbjct 7167 AAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCG 7226 Query 33138 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 33197 | |||||||||||| | ||| | || || | |||||||| |||||||| || ||||| Sbjct 7227 TGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTG 7286 Query 33198 TACATATTCCAGAT 33211 ||||||| ||| || Sbjct 7287 TACATATGCCATAT 7300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633577626454000