Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1455 96.9 4e-15 >seq1455 Length=23522 Score = 96.9 bits (106), Expect = 4e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 157928 GAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATAT 157987 |||| || | || |||||| | ||||| || |||||| || ||||| | ||||| | Sbjct 20253 GAAATGTATTAGAAAATCCTGGATGGTATACTAGTTACACCCCATATCAGCCAGAGATTT 20194 Query 157988 CTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGAC 158047 |||| ||||||||||| | | || |||| ||||| | ||| || | || | Sbjct 20193 CTCAAGGAAGATTGGAGTCACTGTTAAATTTTCAAACATTGGTCAGTGATTTGACGGCTT 20134 Query 158048 TACCGATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCA 158100 |||| || ||||| |||||||||||||| ||| |||| || || || |||||| Sbjct 20133 TACCAATTGCAAATGCATCTCTATTAGACGAACCAACGGCCGCTGCTGAAGCA 20081 Score = 87.8 bits (96), Expect = 2e-12 Identities = 197/296 (67%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 158407 GGTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 158466 ||||||| ||| || || ||| | || ||| || || ||||| | || | ||| Sbjct 19747 GGTGAGTTTGGAGCGGATATAGCTTTTGGAAGTGCCCAGAGATTTGGAGTACCATTAGGA 19688 Query 158467 TACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCT 158526 | || ||||||||||| || |||||||| || |||||||| | || || ||| Sbjct 19687 TTTGGCGGTCCTCATGCCGCTTTCTTTGCTGTGGATGAGAAGTATAAACGTAAAATTCCT 19628 Query 158527 GGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTA 158586 || ||| | | || || ||||| || |||| ||| | || | |||| Sbjct 19627 GGTAGATTAATTGGAATTTCCAAGGATAGACTGGGAAATAGAGCTTTGAGGCTTTCACTT 19568 Query 158587 CAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAA 158646 || || | || |||||||| | | || || || ||||| || | || |||||||| Sbjct 19567 CAAACCCGTGAACAGCATATTCGCCGCGAAAAGGCCACCAGCAATTTATGTACAGCACAG 19508 Query 158647 GCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGACT 158702 || || || ||||||||| ||| ||||||| ||||||||| || |||| || Sbjct 19507 GCTCTCCTAGCTAATATGACTGCTCTCTATGCGATGTATCATGGTCCAAATGGCCT 19452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588000737856400