Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq3038 246 2e-59 seq4661 167 2e-35 seq2201 132 3e-25 seq1897 122 6e-22 seq574 109 4e-18 seq309 87.8 1e-11 >seq3038 Length=8431 Score = 246 bits (272), Expect = 2e-59 Identities = 409/588 (70%), Gaps = 2/588 (0%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 || ||||| |||||||||||||| ||| |||||| | | ||| | ||| | | | Sbjct 3207 ATAGGTATCGATTTAGGAACTACATACTCTTGTGTTGGTATTTTCAGAGATGATCGAATT 3148 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| || |||||||||||||| ||| |||| ||||| || | ||| | ||||| || Sbjct 3147 GAAATCATCGCCAATGACCAAGGAAATCGAACTACACCTTCCTTTGTAGCATTTACGGAT 3088 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 ||||||| | ||||| |||||||||||| |||||| ||| ||||| || || Sbjct 3087 ACTGAACGCTTAATTGGTGATGCTGCTAAAAATCAAGTCGCAATGAATCCAACCAACACA 3028 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 ||||||| || ||| | |||| || || || |||| || | || ||||||||| Sbjct 3027 GTTTTTGACGCCAAACGTCTGATAGGCCGAAAGTTTGCCGACCCTGAAGTACAATCTGAT 2968 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATA 474631 ||| || | || || ||| | || | | ||| |||||| || |||| | Sbjct 2967 ATGAAGCACTTCCCATTCAAGATAGTAGACAAGGCTGGCAAACCAGTCATCGAAGTTGTC 2908 Query 474632 CACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAA 474691 | ||| || || ||||| || |||| ||| |||| ||||| ||||| | ||||| Sbjct 2907 TTCAAAGGAGAGACCAAACAGTTCACACCTGAAGAAATCTCTTCCATGGTACTCACCAAA 2848 Query 474692 ATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGT 474750 ||||| | || || ||| | ||||| || | |||| |||| || | || || Sbjct 2847 ATGAAGGAGACGGCAGAG-GCGTATCTAGGTACACAAGTTGACAATGCTGTCGTAACAGT 2789 Query 474751 TCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGG 474810 || || || || |||||||||||| | ||||| || |||||||| || ||||| || Sbjct 2788 GCCTGCGTACTTCAATGATTCTCAAAGACAAGCTACCAAAGATGCAGGTCTTATTGCTGG 2729 Query 474811 TCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGA 474870 || |||||| | ||||| |||||||| || ||||| || || |||| || |||||||| Sbjct 2728 ACTAAATGTTCTCCGTATCATTAATGAGCCCACAGCTGCTGCTATTGCGTACGGTCTTGA 2669 Query 474871 TAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGG 474918 ||||| || ||| |||||| | |||||||| | ||||| Sbjct 2668 CAAGAAGGTCGAGGGAGAGAGAAATGTACTCATCTTTGACTTAGGAGG 2621 Score = 241 bits (266), Expect = 8e-58 Identities = 543/811 (67%), Gaps = 15/811 (2%) Strand=Plus/Minus Query 475365 CAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCATG 475422 |||| || |||||| | || | || || |||||||| || || |||| || | || Sbjct 2564 CAACCGCAGGAGATACTCACTTGGGAGGAGAAGATTTCGACAACCGACTCGTCAACCAC- 2506 Query 475423 GTGTGTTGAAGATTTCAAGAGGAAA---AATAAAG-TTGATCTTTCAACATCTGCTAAAG 475478 | ||| | || || ||| | ||| || |||| || ||||| ||| |||| || Sbjct 2505 -TTTGTAAATGAGTTTAAGCGCAAACACAAGAAAGATTTATCTTCAAAC----GCTAGAG 2451 Query 475479 CATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTC 475538 || ||||||||||| |||| || |||||||| || || ||| | || || || || | | Sbjct 2450 CACTAAGACGTCTTCGAACCGCATGTGAACGAGCAAAACGAACACTATCCTCATCTGCCC 2391 Query 475539 AAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAA 475598 | || | | ||| ||||||| || |||||||| || || | |||| ||||| Sbjct 2390 AGACATCCATCGAAATTGATTCACTATTTGAAGGTATCGACTTCTATACATCCATTACCC 2331 Query 475599 GGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAAC 475658 | ||| ||||| || | || || || || ||| || | | || || || | Sbjct 2330 GAGCTCGTTTTGAGGAACTCTGCCAAGACCTTTTCAGATCTACCACTACCCCAGTAGATC 2271 Query 475659 AAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAG 475718 ||||| || | ||| ||||||||||| | || ||||| |||||||| || || | Sbjct 2270 GTGTTCTAGCTGACGCCAAAATTGACAAATCAAAGGTACATGAGATTGTTCTAGTTGGTG 2211 Query 475719 GTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGT 475778 | ||||| ||||||| | || | || | | | ||||| ||||| ||| | Sbjct 2210 GATCAACGCGAATTCCCAGGATCCAAAAACTTATCACGGATTATTTCAATGGCAAAGAAC 2151 Query 475779 TAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTA 475838 ||| || | |||||||||||||| || || ||||| ||||| |||||||| || | Sbjct 2150 CCAATAAATCAATCAATCCTGATGAAGCAGTAGCTTATGGTGCTGCGGTCCAAGCTGCAA 2091 Query 475839 TTTTATCAGGTCA---ATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 |||| |||||| | ||| || |||| | || |||| | || || | | Sbjct 2090 TTTTGTCAGGTGATACATCTTCTAAGTCCACAAATGAAATCCTACTACTCGATGTCGCAC 2031 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 |||| ||| | || | ||||| | ||| ||| ||||| || | ||| ||||| | Sbjct 2030 CACTCTCACTCGGAATAGAAACCGCTGGTGGGCAGATGACCAAATTGATTCCTAGAAACA 1971 Query 475956 CTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTG 476015 || ||||||| || || || |||||||||| ||||| ||||| |||||| | || Sbjct 1970 CTACTATCCCCACTAAGAAGTCTGAAGTATTTTCAACTTACTCTGACAATCAACCTGGTG 1911 Query 476016 TAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAA 476075 | ||| ||| | ||||| ||||| || || || ||||| || || ||||| | Sbjct 1910 TTCTCATACAAGTTTTTGAGGGTGAGCGACAACGAACAAAAGACAACAATCTCCTTGGTA 1851 Query 476076 CTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTT 476135 ||| | | || ||||| ||||| || | || || || ||||| || ||||||| Sbjct 1850 AATTTGAGTTAACTGGAATTCCACCTGCCCCACGTGGTGTACCCCAAATAGAGGTTACTT 1791 Query 476136 TTGATATTGATGCAAATGGTATTCTTAATGT 476166 ||||| | |||||||| || ||| | ||||| Sbjct 1790 TTGATTTGGATGCAAACGGAATTATGAATGT 1760 >seq4661 Length=7129 Score = 167 bits (184), Expect = 2e-35 Identities = 377/560 (67%), Gaps = 10/560 (2%) Strand=Plus/Minus Query 475625 GATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGAC 475684 ||||| || | || ||| || |||| || ||||| || |||| ||| | || | | Sbjct 1229 GATCTTTTCCGTAAGACACTTAAACCTGTCGAACAGGTGCTCAAAGACGCAAAGGTCAAG 1170 Query 475685 AAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGA 475744 || || | || |||| ||||||||||| |||||||| || | ||||||||| | Sbjct 1169 AAGTCTGAGGTTGATGATATTGTTCTTGTCGGAGGTTCTACCCGGATTCCAAAAGTTGTT 1110 Query 475745 GAAATGCTTTCATCATATTTTAATGGTAA-AAAGTTAAATGAAAGTG-TAAATCCTGATG 475802 ||| | || | | ||| |||||| |||| |||| | | |||||||||| Sbjct 1109 GAACTTATTGAAGAGTTCTTTGGTGGTAAGAAAGCCTCC--AAAGGGATTAATCCTGATG 1052 Query 475803 AAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGA 475862 ||||||| || | ||| || || ||||| | || || |||| ||| || || || Sbjct 1051 AAGCTGTCGCTTTTGGTGCAGCCGTCCAGGGAGGCGTTCTATCGGGTGAA---GA--AGG 997 Query 475863 AACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTG 475922 ||| || | | | ||||| | ||||| | ||| ||| || | || |||||||| || Sbjct 996 TACTGAAGATT-TAGTACTCATGGACGTCAATCCCCTTACACTCGGAATTGAAACAACTG 938 Query 475923 GAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAG 475982 | || | ||||| || || || ||||||||| ||| || || ||| || | Sbjct 937 GTGGTGTCATGACGAAGCTCATCCCTAGAAATACTGTTATTCCTACCAGAAAGTCGCAGA 878 Query 475983 TATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAA 476042 | || || ||| ||| |||||| || || || || ||| |||||| ||| Sbjct 877 TTTTCTCGACTGCCGTTGACAATCAACCAGTCGTTTTAATTCAGGTCTATGAAGGAGAAC 818 Query 476043 GAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTG 476102 ||| || ||||| ||||| || |||| || | ||| | || ||||| ||||| | Sbjct 817 GAACCTTGACTAAGGATAACAATCAACTCGGGAAATTTGAGCTGACTGGTATCCCTCCAG 758 Query 476103 CTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTA 476162 | || || || |||||||| || || || ||||||| |||| || ||||||||||| | Sbjct 757 CACCAAGGGGTGTTCCTCAGATCGAGGTCTCTTTTGAACTTGACGCTAATGGTATTCTGA 698 Query 476163 ATGTTACTGCTTGTGATAAA 476182 | || |||||| |||||| Sbjct 697 AAGTCTCTGCTTCAGATAAA 678 Score = 140 bits (154), Expect = 2e-27 Identities = 169/224 (75%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 474653 TTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCTC 474711 ||| | || || |||||||| ||||| || | | ||||||||| | || ||| || Sbjct 1808 TTTACCCCTGAGGAAATTTCTGCAATGATTCTTGGAAAAATGAAAGATGTTGCTGAG-TC 1750 Query 474712 ATATCTTGGACAAG--AAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGAT 474769 ||| ||||| ||| |||| ||| ||||||| | |||||||| ||||| ||||||||| Sbjct 1749 ATA-CTTGGG-AAGCAAAGTCACTCATGCAGTTGTAACTGTTCCTGCATACTTTAATGAT 1692 Query 474770 TCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATT 474829 ||| | ||||| ||||||||||| |||| || || || ||||| || | |||||| Sbjct 1691 AATCAGAGACAAGCTACTAAAGATGCCGGAACCATAGCTGGCCTTAACGTACTCCGTATT 1632 Query 474830 ATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 | ||||||||||| || || || |||| || ||||||||||| Sbjct 1631 GTGAATGAACCAACTGCGGCAGCTATTGCGTACGGTCTTGATAA 1588 Score = 93.3 bits (102), Expect = 3e-13 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 474331 AATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGT 474390 |||||| |||||| | || || || || |||||| | ||| |||||| || ||||| Sbjct 2183 AATTGGAATTGATCTTGGCACCACATATTCTTGTGTTGGTGTAATGCAAAAAGGCAAAGT 2124 Query 474391 AGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGA 474450 || || | | ||||||||||| ||| ||| || || |||||||| ||||||| || Sbjct 2123 TGAGATTTTAGTTAATGACCAAGGAAATCGAATCACTCCCTCATATGTCGCTTTTACCGA 2064 Query 474451 AACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCC 474501 ||| | || |||||||||| || ||| | || || || || ||||| Sbjct 2063 CGATGAGCGCCTAGTTGGAGATGCGGCAAAAAACCAGGCAGCTTCAAATCC 2013 >seq2201 Length=24903 Score = 132 bits (146), Expect = 3e-25 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| ||||| |||||||| ||| |||||| | || || |||| | || Sbjct 11298 ACGAAGACGAAGTACGAGATGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAATGT 11239 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | || || ||||| ||||| |||||||| | ||||||||| ||||| ||||| || Sbjct 11238 CCGGCCGTCCTCGAGTTGTTTTCCCGCAAAAATCAAACGTTGTTGGTCAGGTGGAATGCC 11179 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||| ||||| || ||| ||| ||| || || || || | || | | | ||| Sbjct 11178 TTCCTTATCTTGGATTTTTGATTTTACATTGTCGATGGTGTCCGATGACTCCACCT-CAA 11120 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | |||||||||||||| ||||| || || ||||||||||| Sbjct 11119 GCGTAATAGTTTTACCCGTGAGGGTTTTCACGAAAATTTG 11080 >seq1897 Length=19642 Score = 122 bits (134), Expect = 6e-22 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || |||||||| ||| |||||| || || ||||||| || || Sbjct 4616 ACGAAGACGGAGAACTAGATGAAGGGTAGATTCTTTTTGAATGTTGTAATCAGATAATGT 4675 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || ||| |||||||| || |||||||| || | | ||||||||| || |||||||| Sbjct 4676 TCGACCATCCTCAAGTTGTTTGCCAGCAAAGATTAATCTTTGTTGATCGGGTGGAATTCC 4735 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||| || || || ||| ||| ||||| || || | || | | |||| Sbjct 4736 TTCCTTGTCCTGTATTTTACTTTTCACATTATCAATGGTGTCGGATGACTCTA-CCTCAA 4794 Query 480730 GGGTAATAGTTTTACCGGT 480748 ||||||| |||||||| || Sbjct 4795 GGGTAATGGTTTTACCAGT 4813 Score = 102 bits (112), Expect = 5e-16 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 ||||| || || | |||||| || |||||| | || || || | || ||||| | Sbjct 4335 AGACGAAGCACTAAATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAAAGTTCGG 4394 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||| |||||||| ||||| ||||| || | || ||||| || |||||||||||||| Sbjct 4395 CCATCCTCAAGTTGTTTTCCTGCAAATATTAATCGCTGTTGGTCCGGAGGAATTCCTTCT 4454 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGT 480733 || |||||||| || |||||| ||||| || |||| | | | ||| || || Sbjct 4455 TTATCTTGAATTTTGCTTTTGACGTTATCAATGGTGTCAGAAGACTCGA-CTTCGAGAGT 4513 Query 480734 AATAGTTTTACCGGT 480748 ||||||||||||||| Sbjct 4514 AATAGTTTTACCGGT 4528 Score = 98.7 bits (108), Expect = 6e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || || | || ||||| |||||| | ||||| |||| || || Sbjct 4892 ACGAAGACGAAGGACCAAGTGGAGTGTCGATTCTTTTTGGATGTTATAGTCAGAAAGTGT 4951 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || || |||||||| |||||||||||||| || | ||||||||| || |||||||| Sbjct 4952 TCGACCGTCCTCAAGTTGTTTTCCAGCAAAAATTAGTCTTTGTTGATCGGGTGGAATTCC 5011 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG 480714 ||| |||||||| || || ||| ||| || || || |||| Sbjct 5012 TTCTTTGTCTTGTATTTTACTTTTTACATTGTCGATGGTGTCAG 5055 >seq574 Length=26839 Score = 109 bits (120), Expect = 4e-18 Identities = 137/187 (73%), Gaps = 1/187 (1%) Strand=Plus/Plus Query 480577 TACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAG 480636 |||| |||| ||| ||| ||||||| ||||||| ||||||||| || || |||| Sbjct 3110 TACTACCTTTTGAAT-ATTGTAATCAGAAAGAGTTCGTCCATCTTCAAGCTGTTTACCAG 3168 Query 480637 CAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGA 480696 |||| || | ||||||||||||||| || ||||| || || || || |||||| ||| | Sbjct 3169 CAAATATCAAACGTTGTTGATCAGGGGGGATTCCCTCTTTATCCTGGATCTTTGCTTTCA 3228 Query 480697 CAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCT 480756 || ||||| || |||| | | || | ||| |||||||| || || || |||| Sbjct 3229 CATTATCAATTGTGTCAGAGGACTCAACCTCTAAGGTGATAGTTTTGCCAGTTAGGGTCT 3288 Query 480757 TAACGAA 480763 | ||||| Sbjct 3289 TGACGAA 3295 >seq309 Length=26435 Score = 87.8 bits (96), Expect = 1e-11 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | ||||||||||||||||| |||||||| || || ||||| |||||||||| Sbjct 14541 ATGCCGTTGTAACTGTTCCAGCATATTTCAATGATTCACAGCGACAAGCTACTAAAGATG 14482 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGC 474852 | || ||| || || | ||| ||||| || | ||||| ||||| ||||| || Sbjct 14481 CTGGTCAAATAGCTGGCTTGTCTGTACTACGTGTTGTAAATGAGCCAACTGCAGCTGC 14424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267884726841020