Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2201 86.0 5e-12 seq1897 84.2 2e-11 >seq2201 Length=24903 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || ||||| | || || ||||| ||||| | || |||| | Sbjct 11077 ATGCAAATTTTCGTGAAAACCCTCACGGGTAAAACTATTACGCTTGAGGTGGAGTCATCG 11136 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | |||||| || || || || |||||| | || || ||| Sbjct 11137 GACACCATCGACAATGTAAAATCAAAAATCCAAGATAAGGAAGGCATTCCACCTGACCAA 11196 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | | |||| |||||| ||||| || ||||| | | | ||| || | || |||||| Sbjct 11197 CAACGTTTGATTTTTGCGGGAAAACAACTCGAGGACGGCCGGACATTGTCTGACTACAAC 11256 Query 110453 ATTCAAAAAGAATCTAC 110469 || |||||||||||||| Sbjct 11257 ATCCAAAAAGAATCTAC 11273 >seq1897 Length=19642 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 ||||| ||||| | || |||||||||||| | || | ||| || ||||| || ||| Sbjct 4744 GACAAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAAACAACTTGAG 4685 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTAC 110469 |||| ||||| | | |||||||||||||||||||||||||| Sbjct 4684 GATGGTCGAACATTATCTGATTACAACATTCAAAAAGAATCTAC 4641 Score = 82.4 bits (90), Expect = 6e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 110297 ACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTCGGCCAGGTAAAACAG 110356 || |||||||| || ||| | ||| || | |||||| ||| | | |||||| Sbjct 5367 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCTGATACTATCGACAATGTAAAAAGC 5308 Query 110357 AAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAA 110416 || ||| |||||||||||| | || || ||||| ||| | |||| || || || Sbjct 5307 AAAATTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAAAG 5248 Query 110417 CAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTAC 110469 ||| ||||||||| | ||||| | | || ||||| || ||||||||||| || Sbjct 5247 CAGTTGGAGGATGGCCGAACACTTTCCGACTACAATATACAAAAAGAATCCAC 5195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412807058704445