Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2201 114 8e-21 seq1897 113 3e-20 >seq2201 Length=24903 Score = 114 bits (126), Expect = 8e-21 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| ||||| |||||||| |||||||| || || | ||| || |||| || | ||| Sbjct 11280 ATGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAATGTCCGGCCGTCCTCGAGTTG 11221 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 |||||| |||||||||||||| || || || | || | ||||| || || ||||| Sbjct 11220 TTTTCCCGCAAAAATCAAACGTTGTTGGTCAGGTGGAATGCCTTCCTTATCTTGGATTTT 11161 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 || || |||| ||| | |||||| ||| ||||| |||| ||| || |||||||| | Sbjct 11160 -TGATTTTACATTGTCGATGGTGTCCGATGACTCCACCTCAAGCGTAATAGTTTTACCCG 11102 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 | | ||||| || || || ||||| Sbjct 11101 TGAGGGTTTTCACGAAAATTTGCAT 11077 >seq1897 Length=19642 Score = 113 bits (124), Expect = 3e-20 Identities = 150/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | ||||||| || || || |||||| ||||||||||| ||||| ||||| Sbjct 5165 CCACCGCGTAAACGTAGGACTAAGTGAAGAGTGGATTCTTTTTGTATATTGTAGTCGGAA 5224 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| || | || ||||| || ||||| || |||||||| | ||| || ||| | || Sbjct 5225 AGTGTTCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCTCTGTTGGTCTGGTGGG 5284 Query 33643 ACACCTTCTTTGTCGGCAATTTT-CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| |||||| || ||| |||| ||| | || || |||||| | Sbjct 5285 ATGCCTTCTTTGTCCTGAATTTTGCTTTTT--ACATTGTCGATAGTATCAGATGATTCGA 5342 Query 33701 CGTCAACCGTGATCGTTTTACCTGT 33725 | |||| || || ||||| || || Sbjct 5343 CTTCAAGGGTTATAGTTTTGCCAGT 5367 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||| || || ||||| || |||||||||||||||||| Sbjct 4097 ACCACCGCGAAGACGAAGCACTAAGTGGAGAGTCGATTCCTTTTGTATGTTGTAATCGTT 4156 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| | || || | ||| ||||| ||||| ||||| | || || || | || Sbjct 4157 AAGAGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGGTGG 4216 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || || || ||| || | ||| | || || ||||| | Sbjct 4217 AATACCTTCTTTATCTTGGATCTT-ACTTTTGACGTTGTCTATTGTATCTGAAGATTCTA 4275 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| || || ||||| || || || ||||| ||||| |||||||| Sbjct 4276 CTTCAAGAGTTATTGTTTTCCCAGTCAATGTTTTGACAAATATCTGCAT 4324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328676498260800