Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2084 134 2e-26 >seq2084 Length=12802 Score = 134 bits (148), Expect = 2e-26 Identities = 413/629 (66%), Gaps = 21/629 (3%) Strand=Plus/Minus Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || |||||||| | ||| |||||||| | || ||||| || || || || || || Sbjct 8567 GGAACAAATGGAAACTCAAATGGTATTGTACCGATGCTCCGAGTCTTCAATAATACTGCC 8508 Query 104573 CGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAG 104626 | ||||| |||||| ||| ||||| |||| | |||| | ||| | ||| Sbjct 8507 AGATATGTTGATCAAGGTGGTAATAAGCGTCC---GGGAGCATTCGCTATATATTTGGAG 8451 Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG 104686 ||||||||||| ||||| | |||||||| || | || || || || | || || Sbjct 8450 CCATGGCACGCCGATATATTTGAGTTCCTCGACCTCCGCAAAAATCACGGCAAAGAAGAA 8391 Query 104687 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 104745 | || ||| || ||||| |||| || || ||||| || |||||||| ||||||||||| Sbjct 8390 GTTCG-TGCACGTGATCTATTCTATGCCCTTTGGATACCTGATCTCTTTATGAAGAGAGT 8332 Query 104746 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCTGGTCTCTCCGATG 104804 ||| | | ||| | ||| | || | || || | || | |||||||| | |||| Sbjct 8331 TGAAAAAAATGGTGAATGGACCCTGATGTGCCCTTGTGAATG-TCCTGGTCTAGCTGATG 8273 Query 104805 CCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGG--TCGGGCG-A 104861 || || || ||||| || | || |||||| || ||||||| || || | Sbjct 8272 TGTATGGCGATGAATTTGAGGCTTTATATGAAAAGTATGAACAAGAAGGGAAAGGCCGTA 8213 Query 104862 CTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACT 104920 | | || || | | | | ||| | | || || | | ||||| || ||| Sbjct 8212 GAACTATTATGGCA----CAAAAGCTATGGTACTCAATAATCGAAGCACAAACAGAAACT 8157 Query 104921 GGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTG 104980 ||||| || | ||||| |||||||| || ||||| ||||||| |||||||| ||| | Sbjct 8156 GGTACCCCTTTTATGCTCTACAAAGATGCATGTAATAAAAAGAGCAATCAAAAAAATCTC 8097 Query 104981 GGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAG 105040 || ||| || || ||||| ||||| ||||| | |||| || ||||| Sbjct 8096 GGGACTATCCGTAGCTCTAATCTTTGTACCGAAATTGTTGAATACTCATCTCCGGATGAA 8037 Query 105041 ACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG 105100 |||||| ||||| | ||||| | ||| | || | ||||| || ||| || Sbjct 8036 GTGGCTGTTTGTAATTTGGCATCCCTAGCTTTGCCGACCTATGTTAATACAGCTGATAAT 7977 Query 105101 ACATTTGATTATGAAAAACTCCACGAAGT 105129 || ||||||| | | ||||| || || || Sbjct 7976 ACTTTTGATTTTCACAAACTTCATGATGT 7948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583210748932600