Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1897 120 3e-22 >seq1897 Length=19642 Score = 120 bits (132), Expect = 3e-22 Identities = 145/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 ||||| ||||| || || | |||||| | ||||| | || ||| ||||| || ||| Sbjct 4801 ATTACCCTTGAGGTAGAGTCATCCGACACCATTGATAATGTGAAAAGTAAAATACAGGAC 4742 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 || ||||| || |||||||||||||| | ||||| | || ||||||||| | || || Sbjct 4741 AAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAAACAACTTGAGGAT 4682 Query 27144 AGTTCGACCGTT-TCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 || ||| | || || ||||||||||||||||| || || ||| | ||| | ||| | || Sbjct 4681 GGT-CGAACATTATCTGATTACAACATTCAAAAAGAATCTACCCTTCATCTAGTTCTCCG 4623 Query 27203 TTTGCGGGGTGGCAT 27217 | | || ||||| || Sbjct 4622 TCTTCGTGGTGGTAT 4608 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||||||||| ||||| |||| || || | || ||||||||||| ||| | || Sbjct 4325 CATGCAGATATTTGTCAAAACATTGACTGGGAAAACAATAACTCTTGAAGTAGAATCTTC 4266 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || || | |||||| || || ||||| |||||||| || ||||| || || Sbjct 4265 AGATACAATAGACAACGTCAAAAGTAAGATCCAAGATAAAGAAGGTATTCCACCGGACCA 4206 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || || || ||| | ||||| | || || ||||||||| Sbjct 4205 ACAAAGATTGATCTTTGCTGGAAAGCAACTTGAAGATGGACGTACTCTTAACGATTACAA 4146 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| |||||||| ||||| | || || || | ||| | || ||||| Sbjct 4145 CATACAAAAGGAATCGACTCTCCACTTAGTGCTTCGTCTTCGCGGTGG 4098 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 ||||| || |||||||||| ||||| || | || ||| | ||||| | |||||| Sbjct 4528 ACCGGTAAAACTATTACTCTCGAAGTCGAGTCTTCTGACACCATTGATAACGTCAAAAGC 4469 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 ||||||||||| |||||||| || || || || |||||||| ||||||| || || ||| Sbjct 4468 AAAATTCAAGATAAAGAAGGAATTCCTCCGGACCAACAGCGATTAATATTTGCAGGAAAA 4409 Query 27132 CAATTGGAAGACAGTTCGACCGTT-TCCGATTACAACATTCAAAAGGAGTCGACCTTACA 27190 ||| | || || | ||| | || || || |||||||| || || || || || | || Sbjct 4408 CAACTTGAGGA-TGGCCGAACTTTATCAGACTACAACATCCAGAAAGAATCCACTCTTCA 4350 Query 27191 TTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || | ||| | | || ||||| Sbjct 4349 TTTAGTGCTTCGTCTAAGAGGAGGCAT 4323 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 || ||||| || || || |||| ||| | || || | || ||| ||||| |||||| Sbjct 5077 ATCACTCTAGAGGTCGAGTCGTCTGACACCATCGACAATGTAAAAAGTAAAATACAAGAC 5018 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 |||||||| || |||||||||||||| | |||| | || || |||||| | || ||| Sbjct 5017 AAAGAAGGAATTCCACCCGATCAACAAAGACTAATTTTTGCTGGAAAACAACTTGAGGAC 4958 Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 || || |||| || || ||||| ||||| || ||||| | || ||||| | ||| Sbjct 4957 GGTCGAACACTTTCTGACTATAACATCCAAAAAGAATCGACACTCCACTTGGTCCTTCGT 4898 Query 27204 TTGCGGGGTGGCAT 27217 | || |||||||| Sbjct 4897 CTTCGTGGTGGCAT 4884 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 || ||||| |||| || |||||||| ||| | || || | || || | || ||| Sbjct 5367 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCTGATACTATCGACAATGTAAAAAGC 5308 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 |||||||| |||||||||||||| ||||| || |||||| | || || | ||| || || Sbjct 5307 AAAATTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAAAG 5248 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || ||||| || | || ||||||| ||||| || ||||| || || || | || Sbjct 5247 CAGTTGGAGGATGGCCGAACACTTTCCGACTACAATATACAAAAAGAATCCACTCTTCAC 5188 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || | ||||| || ||||| || Sbjct 5187 TTAGTCCTACGTTTACGCGGTGGAAT 5162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434881078564800