Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3986 221 1e-52 >seq3986 Length=15657 Score = 221 bits (244), Expect = 1e-52 Identities = 593/910 (65%), Gaps = 65/910 (7%) Strand=Plus/Plus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 ||||| || || |||||| |||||||| || ||||| || || | || || |||||| Sbjct 6405 TTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGCCAAAGAGATATTT 6464 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACA--A 4374 ||||| |||||||| ||||| | | ||||| | ||| | | || | | | | | Sbjct 6465 TCCATGAAATCAAATGGATTTTTGACTTTGTA-TACTTTGGA-ATTTCCTAACGAGAGGA 6522 Query 4375 GCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA 4434 | | ||| || || || ||||| || ||||| |||| || | ||| || || | || Sbjct 6523 GAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGTTCATGCCGAGTA 6582 Query 4435 -ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATT 4493 | | || || ||||| | || | ||| ||||||||||| ||||||| |||||| Sbjct 6583 GAGCGCAT-GGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGCTTGTGTGATA 6641 Query 4494 ATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCA 4553 | ||| | | | ||||||||| | | || | | ||| | | ||| ||| Sbjct 6642 ACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAGAGGAGACAAGCA 6701 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 || || || | |||||||| | ||| |||||||||||||| |||| || | | Sbjct 6702 AAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGGTTAGGCCAGCC 6761 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 || || |||| || || | |||||| || | ||||| || ||| || ||||| || Sbjct 6762 ATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGAAAAATATTCCC 6821 Query 4674 TCTACGGCGGCAAACGCTACTAATCGGGACCCGAA---CGAGCTGGCTTTGTCTTTAATC 4730 || || || ||||| ||||| | || || || ||| || ||||||||| |||| Sbjct 6822 TCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGA-CT--CTTTGTCTTGAATC 6878 Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTAT------------ 4778 || | ||||||| || |||||||||| || || | | || || Sbjct 6879 CAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATCGTTAACGATTA 6938 Query 4779 ------------------------------------ATAGCGTTAAATAATTTACTTTTT 4802 ||||| || || | | | ||||| Sbjct 6939 TCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAAGATAAGTTTTT 6998 Query 4803 TCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTT 4862 | | | | |||| || ||||| || |||| || ||| ||||||| || |||||| Sbjct 6999 TGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCAGAGTGGATATTT 7058 Query 4863 TCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAA 4922 || || ||| |||||||| |||||| ||||||| || | | || ||||| | | | Sbjct 7059 TCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCACTTCACTGCTA 7118 Query 4923 AATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACA 4982 || | || || | |||||| || || || ||||| ||| |||||||| || | ||| Sbjct 7119 AACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAAAGGCTAGCACA 7178 Query 4983 TGAGATATAAAGTACTGTTCGTCAGGCTT---AAGTTTTTTCCAGTGGGGCAAATCTTTA 5039 |||||||||||||| |||| ||| || | | || ||||| | | | | ||||||| Sbjct 7179 TGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGTGGATATCTTTA 7238 Query 5040 GTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAA 5099 | ||||||| || ||| |||||||||| || || || ||||||||||||||| ||| Sbjct 7239 GACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGTACATATGCCAT 7298 Query 5100 A--TATCAGG 5107 | ||||||| Sbjct 7299 ATCTATCAGG 7308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427013869961045