Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798775.1_202014-12-08] 6,865 sequences; 49,793,988 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2084 699 0.0 seq3986 197 2e-45 >seq2084 Length=12802 Score = 699 bits (774), Expect = 0.0 Identities = 1402/2064 (68%), Gaps = 47/2064 (2%) Strand=Plus/Plus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || |||||||| |||| |||||| | | |||||||| |||||||| |||||||||| Sbjct 7102 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCAGTTTTTAAG 7161 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || | ||||||| |||||||| ||||| | |||| | | || || | Sbjct 7162 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 7221 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 ||||||||||| ||||| ||||| || || || || | |||||| ||||| | || Sbjct 7222 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 7281 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 ||||| || | || ||||||| |||||| | | | ||| || || |||||| Sbjct 7282 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 7341 Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 |||| |||| ||||| || || ||||| ||||| || ||| || || | |||| | Sbjct 7342 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 7401 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 || || | | ||| | | || | || | ||||| || |||||||| ||||| Sbjct 7402 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 7461 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | || || | || | ||| |||||| ||||||||| || | | | ||||| ||| Sbjct 7462 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 7521 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | ||||||| ||| || |||||||| || || || | ||| ||||| | || ||| Sbjct 7522 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 7581 Query 77259 TGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCC 77318 | | || |||| | | |||| | | | ||||||||| | |||| |||| ||| || Sbjct 7582 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 7641 Query 77319 CAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGT 77378 || | ||||||||| || || | || || || | || || || || | Sbjct 7642 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 7701 Query 77379 CCTTCTGTTTCAGCTAGTTCACAACTC--GCTTCCAATGCTCCGTAATAAATTGTTTCGA 77436 ||| | ||| |||| ||| ||| | | | ||| | | ||| || ||||| | Sbjct 7702 CCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 7759 Query 77437 AAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAA 77496 | |||| || ||||||| || ||| || | || || || | | ||| | || Sbjct 7760 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 7819 Query 77497 AGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTT 77556 | ||||||||| || |||||||| | | | || |||| || | |||| | Sbjct 7820 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATTGCTCTTAC 7879 Query 77557 TAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTA 77616 |||||| || | |||||| ||||||| || || |||||||| ||||| ||||| || | Sbjct 7880 GAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACAA 7939 Query 77617 CTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATC-----TAT-AACAAACA 77670 | | | || || | ||||| |||||||||| | ||| ||| |||| | Sbjct 7940 CCTGACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATAGG 7999 Query 77671 TGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTA 77730 | |||||||| ||||| | ||||||||| || || |||| | | |||| | Sbjct 8000 TCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTCAA 8059 Query 77731 TTATCTCGGTACATAGATTA---CTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCT 77787 || |||||||| |||||| |||| |||||| || ||||||| ||| ||||||| Sbjct 8060 CAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTGCTCT 8116 Query 77788 TTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGA 77847 ||||||| |||| || || || || ||||| || || || ||||| | |||| ||||| Sbjct 8117 TTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTCGA 8176 Query 77848 TAATAGATTTCCAGACGACTCTAGCTTTTAT--CATAG-ATTTGTATCGCCTCTCTCTT- 77903 | || || | ||| |||||||| | |||| | || || |||| || ||| Sbjct 8177 TTATTGAGTACCA--------TAGCTTTTGTGCCATAATAGTTCTACGGCCTTTCCCTTC 8228 Query 77904 ----TCATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCA 77957 ||||| || |||| |||| ||||||||||| || | |||||| | | ||| Sbjct 8229 TTGTTCATACTTTTCATATAAAGCC--TCAAATTCATCGCCATACACATCAGCTAGACCA 8286 Query 77958 GGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAG 78017 || |||||| |||||||||| | ||| ||||||| || | ||||| ||||||||| Sbjct 8287 GGACATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAG 8346 Query 78018 AGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTA 78077 |||||||||||||| || ||| |||||||| || | | | |||||| || || | Sbjct 8347 AGATCAGGTATCCAAAGGGCATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGA 8406 Query 78078 TTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCC 78137 || || || ||||| ||||| | ||||| | |||||||| || | |||||| || Sbjct 8407 TTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCG 8466 Query 78138 ATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACT 78197 | |||| || || |||||||| || ||||| | ||||||||| || ||||| | ||| Sbjct 8467 AATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACT 8526 Query 78198 CTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTT 78257 | | ||| || | |||||| || || ||||||||||||| | |||||| || | Sbjct 8527 CGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTC 8586 Query 78258 GCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAA 78317 |||||||| | ||| || || || || || || | ||||| || | ||||||| Sbjct 8587 GCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAA 8646 Query 78318 CGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAG 78377 |||||| ||||||||||| || || ||||| || || |||| | || | ||| || Sbjct 8647 GTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCAT 8706 Query 78378 CTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAAC 78437 ||| | |||| || ||| || || ||||| || || || ||||||||||| Sbjct 8707 GAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAG 8766 Query 78438 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATT 78497 |||| | || | |||||| || || || ||||| ||||| ||||| ||| |||||| Sbjct 8767 TATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATT 8826 Query 78498 CCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTC 78557 || || || |||||||| | |||||| || || | || || | |||| ||| | Sbjct 8827 CCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGA-GGCG 8885 Query 78558 AACAAG-TATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTC 78616 || ||| |||||| |||||| ||| || || |||||||| | ||| |||||||| || Sbjct 8886 AAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATC 8945 Query 78617 GTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATC---CATGACAGT 78673 |||| || | ||||| || | | ||| | || ||||| | || ||| | | | Sbjct 8946 ATAAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACAT-AGATT 9004 Query 78674 AGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTC 78733 | || || || |||||| | |||||||| ||||| ||||| | | | ||| Sbjct 9005 TGCTG--ATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGA 9062 Query 78734 CATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGC 78793 | || | | ||| ||||||||||| |||||||||||||| |||||||| | ||| Sbjct 9063 GACAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGC 9122 Query 78794 AGCTAGAATAGCATAATCAGGATG 78817 || |||||||| || || ||||| Sbjct 9123 TGCAAGAATAGCGTAGTCGGGATG 9146 >seq3986 Length=15657 Score = 197 bits (218), Expect = 2e-45 Identities = 588/913 (64%), Gaps = 62/913 (7%) Strand=Plus/Plus Query 47837 CATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 47896 ||| ||||| |||||||| ||||| || ||||| |||||||| ||||| || || | Sbjct 6392 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 6451 Query 47897 CAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCC 47956 ||| || ||||||||||| |||||||||||||| | || || | ||| | ||| Sbjct 6452 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 6511 Query 47957 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATT 48016 ||| | |||| ||||||||||||||| || || ||||||| || Sbjct 6512 TAACGAGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGTT 6571 Query 48017 CATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGC 48076 ||| || | || ||| || || || || ||||| |||||||| || ||| || Sbjct 6572 CATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGC 6631 Query 48077 --ATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAAC 48134 | || ||| || || | | || | |||| | | ||||||| ||| Sbjct 6632 TTGTGTGATAACATC-CTG-AACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAG 6689 Query 48135 ATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAAT 48194 | | ||| ||||| || || || ||||| || | ||| | |||||||||||| Sbjct 6690 AGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAG 6749 Query 48195 GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAA 48254 || || || | ||| | || ||||| || | |||||| || | || || || ||| Sbjct 6750 GTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTG 6809 Query 48255 AAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG---CTTCG 48311 || ||||| || || || || ||||| || ||| | | ||| | | | ||| | Sbjct 6810 AAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTTTG 6869 Query 48312 TTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCA----------- 48360 | || ||||| || ||||| |||| ||| ||||| | |||||| | Sbjct 6870 TCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATCGT 6929 Query 48361 -------------------------------------TTGTTTCTATAGCATTAAAGAGA 48383 |||| || |||||||| || ||| Sbjct 6930 TAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAAGA 6989 Query 48384 -AAGtttttt-tCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGG 48441 ||||||||| ||| |||||| | ||||||||| |||||||| ||| |||| | Sbjct 6990 TAAGTTTTTTGAGCTTG--ATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCAG 7047 Query 48442 AGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTA 48501 |||| |||||||| || || |||||||| ||||| |||| || || | ||||| | Sbjct 7048 AGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCA 7107 Query 48502 CCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561 | || | | ||| || || | | || ||||| || || || || || ||||||| Sbjct 7108 CTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAA 7167 Query 48562 ATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCAT 48618 | |||| ||||| ||||| ||| ||| | | | | | |||||||| || | Sbjct 7168 AGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGT 7227 Query 48619 TGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTAT 48678 ||||||||| || | ||| | || ||||| |||||||| |||||||| |||||||| | Sbjct 7228 GGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGT 7287 Query 48679 ACATATTCCATAT 48691 |||||| |||||| Sbjct 7288 ACATATGCCATAT 7300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694609188733600