Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq492 513 2e-140 seq388 210 3e-49 >seq492 Length=50397 Score = 513 bits (568), Expect = 2e-140 Identities = 1360/2061 (66%), Gaps = 41/2061 (2%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||| ||||| ||||| ||||| | | |||||||| |||||||| || ||||||| Sbjct 16262 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCAGTTTTTAAG 16321 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || | ||||||| ||||||||||||||||| |||| | | || ||| | Sbjct 16322 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 16381 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 || |||||||| || || ||||| || || || || | || |||||||| | || Sbjct 16382 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 16441 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047 || || |||| || ||||||| ||||| || | | ||||| || |||||| Sbjct 16442 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 16501 Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104 |||| ||||||||||||| || ||||| || || | ||| || || | |||| | Sbjct 16502 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 16561 Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164 ||||| | || | | || | || | ||||| || | |||||| ||||| Sbjct 16562 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 16621 Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224 | || || | || | ||| |||||| |||||| || || | | |||||||| ||| Sbjct 16622 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 16681 Query 53225 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 53284 | ||||||| || ||| || ||||| || || || | ||| ||||| | ||| || Sbjct 16682 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 16741 Query 53285 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 53344 || | || |||| | | |||| || ||||||| ||| | || | ||| ||| Sbjct 16742 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 16801 Query 53345 NNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGT 53404 ||| || ||| | |||| || || | || || ||||||| Sbjct 16802 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 16861 Query 53405 CCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAATGGTTTCGA 53462 ||| || | |||| ||| ||| | || || | | ||| |||||||| | Sbjct 16862 CCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 16919 Query 53463 AGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAA 53522 |||||| || || |||| || ||| || | || ||||| | || | || Sbjct 16920 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 16979 Query 53523 ACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTT 53582 || | ||||||| |||||||| || | | | || |||| || | ||| | || Sbjct 16980 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATT-GCTCTTA 17038 Query 53583 C-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATT 53641 | |||||| || | |||||| ||||||| ||| || |||||||| || || || || | Sbjct 17039 CGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACA 17098 Query 53642 ACTTTGACC-ACATCCTTCAGTTTGAGAAAATCAAA----TTGTCCA-TCTATTA-CAAA 53694 || | ||| ||||| | |||||| |||||||||| || || | ||||| || | Sbjct 17099 ACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATA 17157 Query 53695 CATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTG 53754 | ||| || | ||||||| ||||||||| || || |||| | | | |||| Sbjct 17158 GGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTC 17217 Query 53755 TATTATCTCAGTGCAAAGATTA---CTACACTTGATGGTTCCTAAATTTTGTTGATTACT 53811 | || || || ||||||||| |||| ||| || || | ||||| |||||| || Sbjct 17218 AACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTGCT 17274 Query 53812 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTC 53871 |||||| ||||| ||||| || || || || || || ||||||||||| | || | ||| Sbjct 17275 CTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTC 17334 Query 53872 TATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT-T 53930 || || | | ||| | | ||| || |||| || || | |||| ||| | Sbjct 17335 GATTATTGAGTACCATAGCTTTTGTGCC---ATAATAG--TTCTACGGCCTTTCCCTTCT 17389 Query 53931 CGT--ATAGTGT--ATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 53986 || ||| | | ||| || ||||| || || || | |||| | | |||||| Sbjct 17390 TGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATCAGCTAGACCAGGA 17449 Query 53987 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 54046 |||||| || ||||||| | ||| || || | | | |||| |||||||||||| Sbjct 17450 CATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGA 17509 Query 54047 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 54105 ||||| |||||||| || ||| |||||||| | | | | ||| || || || ||| Sbjct 17510 TCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATT 17568 Query 54106 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCAT 54165 || || ||||||||| | | ||||| | ||||| || ||||| ||||| | | Sbjct 17569 TTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAA 17628 Query 54166 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 54225 |||| || || || || || || ||||| | ||||| || || ||||| | |||| Sbjct 17629 TGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCG 17688 Query 54226 CAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGC 54285 | ||| || | ||||||||| || ||||| || || | |||||| || | || Sbjct 17689 GAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGC 17748 Query 54286 ACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCG 54345 ||||| | ||| || || || || || || ||||||| || | ||||| Sbjct 17749 GCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGT 17808 Query 54346 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 54405 ||| || ||||| ||||| || || |||||||| || |||| | || || ||| || Sbjct 17809 TTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGA 17868 Query 54406 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 54465 ||| | ||| | ||| || || ||||| ||||| ||||| |||||||| | Sbjct 17869 AGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTA 17928 Query 54466 TTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCC 54525 ||| | || | |||||| || ||||| ||||| || || || || ||| |||||||| Sbjct 17929 TTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATTCC 17988 Query 54526 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAG 54585 || ||||||||||||| ||| || || || | || || || || | || | || Sbjct 17989 AACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGAGGCGAAG 18048 Query 54586 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 54645 | || ||| |||||| ||| || || |||||||| | ||| ||||||||| || || Sbjct 18049 AAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATCATA 18108 Query 54646 AATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAAC---TACATCCATGGTAATACT 54702 || || | || || || | | | | || || |||| | | | ||| | | || Sbjct 18109 AACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACATAGATTTGCT 18168 Query 54703 TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCAT 54762 || || ||||| |||||||||||| ||||| ||||| | | | ||| | Sbjct 18169 ---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGAGAC 18225 Query 54763 CACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGC 54822 |||| | ||| ||||||||||| |||||||||||| || || ||||| | || || Sbjct 18226 AACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGCTGC 18285 Query 54823 TAGAATGGCATAATCCGGATG 54843 ||||| || || || ||||| Sbjct 18286 AAGAATAGCGTAGTCGGGATG 18306 >seq388 Length=15577 Score = 210 bits (232), Expect = 3e-49 Identities = 590/914 (65%), Gaps = 64/914 (7%) Strand=Plus/Minus Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890 ||| ||||| ||||| || ||||| || |||||||||||||| ||||| || || | Sbjct 9267 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 9208 Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCC 23950 || || ||||||||||||||||| ||||||| | || || || | | || || | | Sbjct 9207 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACT-TTGGAATTTC 9149 Query 23951 CAATTCAGAAATCAA-TCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAAT 24009 | | ||| || || |||||| || || || || || ||||||| | Sbjct 9148 CTAACGAGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 9089 Query 24010 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 24069 |||| || | || ||| || || |||| |||||||||||||| || ||| | Sbjct 9088 TCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGG 9029 Query 24070 CGTCTGTTATAATA----GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTA 24125 | | ||| |||| | || | |||| || || ||| | |||||| | Sbjct 9028 CTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTC----AAATGTGAA 8973 Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 || | | ||| || || || |||||| || ||||| | ||| | |||||| ||| Sbjct 8972 AAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAA 8913 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || || || || | ||| | || || || || | |||||| ||||| ||||| || ||| Sbjct 8912 AAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCA 8853 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAAC-CGGCGCT 24304 || || ||||| || ||||| ||||| || | ||| | || |||| | || | || Sbjct 8852 CTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCT 8793 Query 24305 --GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------- 24354 ||| || ||||| ||||| || | ||| || || | |||||| | Sbjct 8792 TTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAAT 8733 Query 24355 ----------------------------------------TTGTCTCTATAGCATTAAAG 24374 ||||||| |||||||| || Sbjct 8732 CGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAA 8673 Query 24375 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 24434 ||||| |||||| | |||||| | || ||||| || ||||| ||| |||| Sbjct 8672 AGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCA 8613 Query 24435 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 24494 || || || ||||| || ||||||||||| || || |||||||||| | |||||| Sbjct 8612 GAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGC 8553 Query 24495 ACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 24554 ||||| | | ||| || || | | |||||||| || || ||||| ||| |||||| Sbjct 8552 ACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAA 8493 Query 24555 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCA 24611 || || | ||||| |||||| ||| ||| || | | | ||||||||||| Sbjct 8492 AAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCG 8433 Query 24612 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 24671 | |||||||||||| | ||| | || || | |||||||| |||||||| || ||||| Sbjct 8432 TGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTG 8373 Query 24672 TACATATTCCAGAT 24685 ||||||| ||| || Sbjct 8372 TACATATGCCATAT 8359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593674473348000