Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq388 116 3e-21 >seq388 Length=15577 Score = 116 bits (128), Expect = 3e-21 Identities = 228/333 (68%), Gaps = 7/333 (2%) Strand=Plus/Minus Query 16461 TCTCTATTGCATTAAATAAATAAtttttttCTTTGCT--ATCTAAAATATAAGTATCTAT 16518 |||| || ||||| || | |||| |||||| ||| |||| || |||||||| || Sbjct 8689 TCTCGATAGCATTGAAAAGATAAGTTTTTTGA--GCTTGATCTTTTATGTAAGTATCGAT 8632 Query 16519 TAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCA 16578 || | ||| |||| || || ||||| ||||| || ||||| ||||||||| | Sbjct 8631 TAAAAGCGAATAAGTTTCAGAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAA 8572 Query 16579 TCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTAT 16638 |||||| || | || || |||||| | ||||| || | | |||||| ||||| || Sbjct 8571 TCTAGCCTCAGGAATCTGCACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAAT 8512 Query 16639 TCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--T 16696 || || || |||||||| || || | || ||||| | | ||| | ||| | Sbjct 8511 CCCGTCTGAGGCGGCAAAAAAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATT 8452 Query 16697 GAAAGTTTTAA-CCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAA 16755 || | ||| ||| || | |||||| || ||||| | ||| || |||||||||| Sbjct 8451 GAGACGGTTATTCCAATCGTGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAA 8392 Query 16756 AGAAGCAACAGCCTTTTTATACATTTTCCATAT 16788 ||| || | || ||||| ||||| | |||||| Sbjct 8391 AGATGCCTCGGCTTTTTTGTACATATGCCATAT 8359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462475288110000