Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq388 143 3e-29 >seq388 Length=15577 Score = 143 bits (158), Expect = 3e-29 Identities = 342/512 (67%), Gaps = 4/512 (1%) Strand=Plus/Minus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 |||||||| |||| |||| |||||| || |||||||| || || ||| || |||||| Sbjct 9254 TTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGCCAAAGAGATATTT 9195 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 14031 ||||| ||||||||||||||| ||||| | | ||||| | |||| | || Sbjct 9194 TCCATGAAATCAAATGGATTT-TTGACTTTGTATACTTTGGAATTTCCTAACGAGAGGAG 9136 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 | || ||| |||| ||| || || || || ||| | | ||||| || | ||| Sbjct 9135 AAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGTTCATGCCGAGTAG 9076 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 || | | |||| |||||||| |||||| || || | | |||| Sbjct 9075 AGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGCTTGTGTGATAAC 9016 Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 14211 | | || | | ||||| || | || | |||| ||| | | ||| ||||| Sbjct 9015 ATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAGAGGAGACAAGCAAA 8956 Query 14212 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 14271 || || ||||| || || | |||||||||||| ||||| |||| || | ||| Sbjct 8955 GTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGGTTAGGCCAGCCAT 8896 Query 14272 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 14331 ||| |||||||| || |||||||| || | ||| || || || || ||||||||||| Sbjct 8895 CAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGAAAAATATTCCCTC 8836 Query 14332 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATT 14390 ||||||||||| |||| | |||| |||||| | | | ||||| | || ||||| Sbjct 8835 CACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTTTGTCTTGA-ATCCAAC 8777 Query 14391 TTCTAGCCCATTCAGAtttttttttAATAAAA 14422 ||||| ||||| ||||| |||||| || Sbjct 8776 GGACGGCCCAGTCAGACTTTTTCTTAATACAA 8745 Score = 95.1 bits (104), Expect = 1e-14 Identities = 198/290 (68%), Gaps = 9/290 (3%) Strand=Plus/Minus Query 14474 ATGTATGTATCAATAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14532 ||||| ||||| || | |||| | || |||||||||| || |||||||| || || Sbjct 8645 ATGTAAGTATCGATTAA-AAGCGAATAAGTTTCAGAGTGGATATTTTCCATCATAATTTG 8587 Query 14533 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAA 14592 ||| |||||||| ||||||| || | || || || | ||| | ||| | | Sbjct 8586 AAATCCATAAAAGAATCTAGCCTCAGGAATCTGCACTTCACTGCTAAACCGCTCGACGAG 8527 Query 14593 ATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCA--ATATGTTTTTAATAAAG 14650 ||||||||||| || || || || |||||||| || | | ||| | |||||| Sbjct 8526 GTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAAAGGCTAGCACATGAGAT--ATAAAG 8469 Query 14651 TATTGCTCTTCATTGCTGA---GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACT 14707 ||| | || |||| ||| | || ||||||||| | ||| ||||| | ||| | Sbjct 8468 TATCGTTCATCATCATTGAGACGGTTATTCCAATCGTGGATATCTTTAGACAAATCAATC 8409 Query 14708 TCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATAT 14757 || ||| | ||||||||| || | |||||||| ||||| |||||| Sbjct 8408 TCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGTACATATGCCATAT 8359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482307313818000