Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq492 513 2e-140 seq388 219 5e-52 >seq492 Length=50397 Score = 513 bits (568), Expect = 2e-140 Identities = 1361/2062 (66%), Gaps = 43/2062 (2%) Strand=Plus/Plus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 ||||| ||||| ||||| ||||| | | |||||||| |||||||| || ||||||| Sbjct 16262 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCAGTTTTTAAG 16321 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || | ||||||| |||||||||||| |||| |||| | | || ||| | Sbjct 16322 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 16381 Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 || |||||||| || || ||||| || || || || | || |||||||| | || Sbjct 16382 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 16441 Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285 || || |||| || ||||||| ||||| || | | ||||| || |||||| Sbjct 16442 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 16501 Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342 |||| |||||||||| || || ||||| || || | ||| || || | |||| | Sbjct 16502 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 16561 Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402 ||||| | || | | || | || | || || || | ||| || ||||| Sbjct 16562 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 16621 Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462 | || || | || | ||| |||||| |||||| || || | |||||||| ||| Sbjct 16622 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 16681 Query 62463 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62522 | ||||||| || ||| || ||||| || || || | ||| ||||| | ||| || Sbjct 16682 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 16741 Query 62523 TATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNN 62582 || | || |||| | | |||| | ||||||| ||| | || | ||| ||| Sbjct 16742 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 16801 Query 62583 NNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATATGGT 62642 ||||| || ||| | |||| || || | || || || |||| Sbjct 16802 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 16861 Query 62643 CCTTCCTTCTCAGCTAGTTTACAACTC--GCCTCTAATGCACCGTAATAAATGGTTTCAA 62700 ||| || | |||| | ||||| | || || | | ||| |||||||||| Sbjct 16862 CCTAGTTTTTTGGCTAAGT--CAACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 16919 Query 62701 AGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAA 62760 |||||| || || |||| || ||| || || || ||||| | || | || Sbjct 16920 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 16979 Query 62761 ACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTT 62820 || | || |||| |||||||| || | | | || |||| || | ||| | || Sbjct 16980 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATT-GCTCTTA 17038 Query 62821 C-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATT 62879 | |||||| || | |||||| ||||||| ||| || |||||||| ||||| || || | Sbjct 17039 CGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACA 17098 Query 62880 ACTTTGACC-ACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC-----TATTA-CAAA 62932 || | ||| ||||| | |||||| |||||||||| ||| ||||| || | Sbjct 17099 ACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATA 17157 Query 62933 CATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTG 62992 | ||| || | ||||||| |||||| || || || |||| | | | |||| Sbjct 17158 GGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTC 17217 Query 62993 TATTATCTCAGTGCAAAGATTA---CTACACTTGATAGTTCCTAAATTTTGTTGATTACT 63049 | || || || ||||||||| |||| |||||| || | ||||| |||||| || Sbjct 17218 AACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTGCT 17274 Query 63050 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 63109 |||||| ||||| ||||| || || || || || || ||||||||||| | || | ||| Sbjct 17275 CTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTC 17334 Query 63110 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT-T 63168 || || | | ||| | | | ||| || |||| || || |||||| ||| | Sbjct 17335 GATTATTGAGTACCATAGCTTTTGTGCC---ATAATAG--TTCTACGGCCTTTCCCTTCT 17389 Query 63169 CGTATAGAGT----ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGA 63224 || | | | ||| || || || || || || | |||| | | | |||| Sbjct 17390 TGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATCAGCTAGACCAGGA 17449 Query 63225 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63284 |||||| || ||||||| | ||| || || | | | |||| |||||||||||| Sbjct 17450 CATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGA 17509 Query 63285 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATT 63343 ||||| |||||||| || ||| |||||||| | || | | ||| || || || ||| Sbjct 17510 TCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATT 17568 Query 63344 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63403 || || ||||||||| | | ||||| | ||||| || ||||| ||||| || | Sbjct 17569 TTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAA 17628 Query 63404 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63463 |||| || || || || || || ||||| | ||||| || || ||||| | |||| Sbjct 17629 TGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCG 17688 Query 63464 CAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGC 63523 | ||| || | |||||| ||||| | ||||| || || | |||||| | || | || Sbjct 17689 GAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGC 17748 Query 63524 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 63583 ||||| | ||| || || || || || || ||||||| || | ||||| Sbjct 17749 GCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGT 17808 Query 63584 TTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63643 ||| || || || ||||| || || || ||||| || |||| | || || ||| || Sbjct 17809 TTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGA 17868 Query 63644 AGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 63703 ||| | ||| | | ||| || || ||||| ||||| ||||| |||||||| | Sbjct 17869 AGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTA 17928 Query 63704 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 63763 ||| | || | |||||| || ||||| ||||| || || || || ||| |||||||| Sbjct 17929 TTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATTCC 17988 Query 63764 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAA 63823 || ||||||||||||| ||| || || || | || |||||||| | || | || Sbjct 17989 AACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGA-GGCGAA 18047 Query 63824 CAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 63882 ||| || ||| |||||| ||| || || |||||||| | ||| ||||||||| || | Sbjct 18048 GAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATCAT 18107 Query 63883 AAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATC---CATGGTAATAC 63939 ||| || | ||||| |||| | | | || || |||| | || ||| | | | Sbjct 18108 AAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACATAGATTTGC 18167 Query 63940 TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCA 63999 | || || ||||| |||||||||||| ||||| ||||| | | | | ||| | Sbjct 18168 T---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGAGA 18224 Query 64000 TCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGG 64059 |||| | ||| ||||||||||| ||||||||||| || | ||||| | || | Sbjct 18225 CAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGCTG 18284 Query 64060 CTAGAATGGCATAATCCGGATG 64081 | ||||| || || || ||||| Sbjct 18285 CAAGAATAGCGTAGTCGGGATG 18306 >seq388 Length=15577 Score = 219 bits (242), Expect = 5e-52 Identities = 593/913 (65%), Gaps = 62/913 (7%) Strand=Plus/Minus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 ||| ||||| ||||| || ||||| || |||||||||||||| ||||| || || | Sbjct 9267 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 9208 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397 ||| || |||||||||||||||||||| ||||| | || ||||| | ||| | ||| Sbjct 9207 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 9148 Query 33398 CAATTCAGAAATCAA-TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456 || ||| || || |||||| |||||||| || || ||||||| | Sbjct 9147 TAACG-AGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 9089 Query 33457 TCATTCCTATGAGTTTAAC---TGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATA 33513 |||| || |||| | | ||| || || |||| |||||||||||||| || | Sbjct 9088 TCATGCC---GAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGA 9032 Query 33514 CCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAA 33573 | || | ||| |||| | ||| | | | | ||| || |||||| || Sbjct 9031 CGGCTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAA 8972 Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633 | | | ||| || || || ||| || || ||||| | ||| | ||||||||||| Sbjct 8971 AGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAA 8912 Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693 | || || || | ||| | || || || || | |||||| |||||||| || || || Sbjct 8911 AGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCAC 8852 Query 33694 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGCT- 33751 || || ||||| || ||||||||||| || | ||| | | |||| | || | || Sbjct 8851 TGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTT 8792 Query 33752 -GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------TC 33803 ||| || ||||| ||||| || | ||| || || | |||||| | || Sbjct 8791 TGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATC 8732 Query 33804 GTT-----------------------------------------TCTATGGCATTAAAGA 33822 ||| || || ||||| || | Sbjct 8731 GTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAA 8672 Query 33823 GATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCG 33882 |||| |||||| | |||||| | ||||||||||| ||||| ||| |||| | Sbjct 8671 GATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCAG 8612 Query 33883 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCA 33942 | || || ||||| || || |||||||| || || |||||||||| | |||||||| Sbjct 8611 AGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCA 8552 Query 33943 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAA 34002 |||| | | ||| || || | | |||||||| || || || || ||| ||||||| Sbjct 8551 CTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAA 8492 Query 34003 ACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCAT 34059 | || | ||||| |||||| ||| ||| || | | | ||||||||||| | Sbjct 8491 AGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGT 8432 Query 34060 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 34119 |||||||||||| | ||| | || || | |||||||| |||||||| || ||||| | Sbjct 8431 GGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGT 8372 Query 34120 ACATATTCCAGAT 34132 |||||| ||| || Sbjct 8371 ACATATGCCATAT 8359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629767608228000