Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq492 565 4e-156 seq388 214 3e-50 >seq492 Length=50397 Score = 565 bits (626), Expect = 4e-156 Identities = 1374/2062 (67%), Gaps = 43/2062 (2%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| ||||| ||||| ||||| | | |||||||| |||||||| || ||||||| Sbjct 16262 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCAGTTTTTAAG 16321 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || | ||||||| ||||||||||| |||| |||| | | || ||| | Sbjct 16322 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 16381 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || |||||||| || || ||||| || || || || | || |||||||| | || Sbjct 16382 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 16441 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || || |||| || ||||||| ||||| || | | ||||| || |||||| Sbjct 16442 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 16501 Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 |||| |||||||||| || || ||||| | || || | ||| || || | ||| | Sbjct 16502 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 16561 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 ||||| | || | | || | || | ||||| || | |||||| ||||| Sbjct 16562 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 16621 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 | || || | || | ||| |||||| ||||||||| || | | |||||| ||| Sbjct 16622 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 16681 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194 | ||||||| || ||| |||||||| || || || | ||| ||||| | ||| || Sbjct 16682 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 16741 Query 79195 TATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTC 79254 || || |||| | | |||| ||| ||||||||||| | || | || ||| | Sbjct 16742 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 16801 Query 79255 CAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGT 79314 || | ||| ||||| || ||| | ||| || || ||| || || || | Sbjct 16802 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 16861 Query 79315 CCTTCCTTTTCGGCTAATTCACAACTC--GCCTCTAATGCTCCGTAATAAATGGTTTCGA 79372 ||| |||| |||||| ||| ||| | || ||| | | ||| |||||||| | Sbjct 16862 CCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 16919 Query 79373 AAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAA 79432 | |||| || ||||||| || ||| ||| | || ||||| | || | || Sbjct 16920 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 16979 Query 79433 ACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTT 79492 || | ||||||| |||||||| || | | | || |||| || | ||| | || Sbjct 16980 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATT-GCTCTTA 17038 Query 79493 C-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATT 79551 | |||||| || | |||||| ||||||| ||| || |||||||| |||||||| |||| Sbjct 17039 CGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACA 17098 Query 79552 ACTTTGACC-ACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC-----TATTA-CAAA 79604 || | ||| ||||| | |||||| |||||||||| ||| ||||| || | Sbjct 17099 ACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATA 17157 Query 79605 CATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTG 79664 | ||| || | ||||||| ||||||||| || || |||| | | | |||| Sbjct 17158 GGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTC 17217 Query 79665 TATTATTTCAGTGCAGAGGTTA---CTACACTTAATGGTTCCTAAATTTTGTTGATTACT 79721 | ||||| || || || ||| |||| || || || | ||||| |||||| || Sbjct 17218 AACAATTTCGGTACAAAGATTAGAGCTACGGATA---GTCCCGAGATTTTTTTGATTGCT 17274 Query 79722 CTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTC 79781 |||||| ||||| ||||| || || || || || || ||||||||||| | || | ||| Sbjct 17275 CTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTC 17334 Query 79782 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTT-- 79839 || || | | ||| | | | ||| || |||| || || | |||| ||| Sbjct 17335 GATTATTGAGTACCATAGCTTTTGTGCC---ATAATAG--TTCTACGGCCTTTCCCTTCT 17389 Query 79840 ---TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGA 79896 || || | | |||||| || || || || || | ||||| ||| |||||| Sbjct 17390 TGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATCAGCTAGACCAGGA 17449 Query 79897 CATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGA 79956 ||||| ||| ||||||| | ||| || |||| | | |||| |||||||||||| Sbjct 17450 CATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGA 17509 Query 79957 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATT 80015 ||||| |||||||| || ||| |||||||| | | | | || || || || ||| Sbjct 17510 TCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATT 17568 Query 80016 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 80075 || || ||||||||| | | ||||| | ||||| || ||||| ||||| || | Sbjct 17569 TTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAA 17628 Query 80076 AACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 80135 ||||||| || || || || || ||||| | ||||| || || ||||| | |||| Sbjct 17629 TGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCG 17688 Query 80136 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGC 80195 | ||| || | ||||||||| || | ||||| || || | |||||| || | || Sbjct 17689 GAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGC 17748 Query 80196 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 80255 ||||| | ||| || || || || || || ||||||| || | ||||| Sbjct 17749 GCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGT 17808 Query 80256 TTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCT 80315 ||| || ||||| ||||| || || || ||||| || |||| | || || ||| || Sbjct 17809 TTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGA 17868 Query 80316 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 80375 ||| | ||| | ||| || || ||||| ||||| ||||| |||||||| | Sbjct 17869 AGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTA 17928 Query 80376 TTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCC 80435 ||| | |||| |||||| || ||||| ||||| ||||| || || ||| |||||||| Sbjct 17929 TTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATTCC 17988 Query 80436 TACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAA 80495 || ||||||||||||| ||| || || || | || || || || | ||| | || Sbjct 17989 AACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGA-GGCGAA 18047 Query 80496 CAAG-TAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 80554 ||| || ||| |||||| ||| || || |||||||| | ||| ||||||||| || | Sbjct 18048 GAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATCAT 18107 Query 80555 AAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC---TACATCCATGGTGATAC 80611 ||| || | || || || | | | | || || |||| | | | ||| | | | Sbjct 18108 AAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACATAGATTTGC 18167 Query 80612 TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCA 80671 | || || ||||| |||||||||||| ||||| ||||| | | | | ||| | Sbjct 18168 T---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGAGA 18224 Query 80672 TCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGG 80731 |||| | ||| ||||||||||| ||||||||||| || || ||||| | || | Sbjct 18225 CAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGCTG 18284 Query 80732 CTAAAATGGCATAATCTGGATG 80753 | | ||| || || || ||||| Sbjct 18285 CAAGAATAGCGTAGTCGGGATG 18306 >seq388 Length=15577 Score = 214 bits (236), Expect = 3e-50 Identities = 589/910 (65%), Gaps = 56/910 (6%) Strand=Plus/Minus Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715 ||| ||||| ||||| || ||||| || |||||||||||||| ||||| || || | Sbjct 9267 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 9208 Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775 ||| || |||||||||||||||||||| ||||| | || || || | ||| | ||| Sbjct 9207 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 9148 Query 49776 CAATTCAGAAATCAA-TCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 49834 || ||| || || ||| || || ||||| || || ||||||| | Sbjct 9147 TAACG-AGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 9089 Query 49835 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 49894 |||| || | || ||| || || |||| |||||||||||||| || || | Sbjct 9088 TCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGG 9029 Query 49895 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 49954 | | ||| |||| | ||| | | | | ||| ||| |||||| ||| | Sbjct 9028 CTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAGA 8969 Query 49955 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 50014 | ||| || || || ||| || || ||||| | ||| |||||||| ||||| | Sbjct 8968 GGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGG 8909 Query 50015 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAA 50074 | || || | ||| | || || || || | |||||| ||||| ||||| || ||| | Sbjct 8908 TTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGA 8849 Query 50075 AGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGT 50131 | || ||||| || ||||| ||||| || ||||| | | |||| | | | | ||| Sbjct 8848 AAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTTTGT 8789 Query 50132 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------TCGTT 50184 | || ||||| ||||| || | ||| || || | |||||| | ||||| Sbjct 8788 CTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATCGTT 8729 Query 50185 -----------------------------------------TCTATGGCATTAAAGAGAT 50203 || || ||||| || |||| Sbjct 8728 AACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAAGAT 8669 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 | |||||| | |||||| | ||||||||||| ||||| ||| |||| || | Sbjct 8668 AAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCAGAGT 8609 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 | || ||||| || || |||||||| || || |||||||||| | ||||||||||| Sbjct 8608 GGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCACTT 8549 Query 50324 CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 50383 | | | ||| || || | | |||||||| || || ||||| ||| |||||||| | Sbjct 8548 CACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAAAGG 8489 Query 50384 CCAATACATGTTTTATAAAATGTTTTTCGT--TGGGTGTTA-GTTTATTCCAATCATTGA 50440 | | ||||| |||||| | | ||| | | || | | ||||||||||| | || Sbjct 8488 CTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGTGGA 8429 Query 50441 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 50500 |||||||||| | ||| | || || | |||||||| |||||||| || ||||| |||| Sbjct 8428 TATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGTACA 8369 Query 50501 TATTCCAGAT 50510 ||| ||| || Sbjct 8368 TATGCCATAT 8359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718211787414000