Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq492 569 3e-157 seq388 183 4e-41 >seq492 Length=50397 Score = 569 bits (630), Expect = 3e-157 Identities = 1381/2075 (67%), Gaps = 43/2075 (2%) Strand=Plus/Plus Query 70788 TTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACAT 70847 ||| | ||| | || |||||||| |||| ||||| || | |||||||| |||||||| Sbjct 16249 TTCTTGGTCAACGGTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACAT 16308 Query 70848 GCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGC 70906 ||| ||||||| || | ||||||| |||||||||||| |||| |||| |||| Sbjct 16309 GCCAGTTTTTAAGCCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGT 16368 Query 70907 TAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTG 70966 | || || | |||||||||||| ||||| ||||| || || || || | || | Sbjct 16369 TGGG-TCTTTCAAGTGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAG 16427 Query 70967 CAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAA 71026 ||||||| | || || || |||| || ||||||| ||||| || | | |||| Sbjct 16428 CAGCCATCTGAATTATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAA 16487 Query 71027 TATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTT 71083 | || |||||| |||| |||||||||| || || ||||| | || || | ||||| Sbjct 16488 TTTCGGCTGGAATATTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTT 16547 Query 71084 TGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTA 71143 | || | ||| |||||| | || | | || | || | ||||| || | Sbjct 16548 TCATGTTATCAGACCATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAA 16607 Query 71144 CTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTG 71203 |||||| ||||| | || || | || | ||| |||||| |||||| || || | Sbjct 16608 TTTGAAACTCTCCTGCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAAC 16667 Query 71204 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGAC 71263 |||||||| ||| | ||||||| || ||| || ||||| || || || | || | Sbjct 16668 ACTCATTAAATCCAAGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGC 16727 Query 71264 TATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCG 71323 |||| | ||| |||| | |||| | | |||| ||| ||||||| ||| | || | Sbjct 16728 TATTCCGAAGGCCATAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTG 16787 Query 71324 ATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCAT 71383 ||| ||| || | ||| || || | | Sbjct 16788 TAGGTGTAACGCCCCACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGT 16847 Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTC--GCCTCTAATGCTCCATA 71441 | || ||||||| ||| ||||| ||||| ||| ||| | || ||| ||| Sbjct 16848 AAGTCTCGTATGTACCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATG 16905 Query 71442 ATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATA 71501 ||| |||||||| || |||| || ||||||| || ||| || || || ||||| | Sbjct 16906 ATATATGGTTTCAAAGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAA 16965 Query 71502 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCT 71561 || | |||| | ||||||| |||||||| || | | | || |||| ||| | Sbjct 16966 GCGCAAAGCCAAAAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCG 17025 Query 71562 CTTATTAGAAATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGA 71620 ||| | || | |||||| || | |||||| ||||||| ||| || |||||||| | Sbjct 17026 TAAATT-GCTCTTACGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCA 17084 Query 71621 GATTTCTGACTATTACTTTGACC-ACATCCTTTAGTTTGAGAAAATCAAATCTCCCATC- 71678 |||| || |||| || | ||| ||||| | |||||| |||||||||| | ||| Sbjct 17085 GATTCCTAACTACAACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCA 17143 Query 71679 ----TATTACAAACACGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATT 71732 ||||| | | | || ||| || | ||||||| ||||||||| || || |||| Sbjct 17144 GCTGTATTA-ACATAGGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATC 17202 Query 71733 AGCATCGGCATATTGTATAATTTCAGTGCAAAGATTA---CTACACTTGATGGTTCCTAA 71789 | | | |||| | |||||| || ||||||||| |||| ||| || || | Sbjct 17203 CGGAGATGAGTATTCAACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAG 17259 Query 71790 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGT 71849 ||||| |||||| |||||||| ||||| ||||| || || || ||||| || |||||||| Sbjct 17260 ATTTTTTTGATTGCTCTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGT 17319 Query 71850 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-TTCTT-- 71906 ||| | || | ||| || || | | ||| | | | ||| || ||| |||| Sbjct 17320 TTCTGTTTGTGCTTCGATTATTGAGTACCATAGCTTTTGTGCC---ATAATAGTTCTACG 17376 Query 71907 GTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATT 71966 | | || |||| ||| || | | |||||| || || || || || | ||| Sbjct 17377 GCCTTTCCCTTCTTGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATC 17436 Query 71967 GTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCG 72026 ||| |||||||||||| || ||||||| | ||| || |||| | | |||| Sbjct 17437 AGCTAGACCAGGACATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCT 17496 Query 72027 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCT 72085 ||||||||||||||||| |||||||| || ||| |||||||| | | | | || | Sbjct 17497 CTTCATAAAGAGATCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTT 17555 Query 72086 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 72145 | || || ||| || || ||||||||| | | ||||| | ||||| || |||| Sbjct 17556 CTTTGCCGTGATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCA 17615 Query 72146 AGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 72205 | ||||| || | ||||||| || || || || || ||||| | ||||| || || | Sbjct 17616 AATATATAGCGAATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTAT 17675 Query 72206 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 72265 |||| | |||| | ||| || | ||||||||| || ||||| || || | ||||| Sbjct 17676 TATTGAAGACTCGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATAT 17735 Query 72266 AGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 72325 | || | || ||||| ||| || || || || || || ||||||| | Sbjct 17736 AAGCACCTGTCGCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAA 17795 Query 72326 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 72385 | | ||||| ||| || ||||| ||||| || || |||||||| || |||| | || Sbjct 17796 TCATAGCGCAAGTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAA 17855 Query 72386 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 72445 || ||| || ||| | ||| | ||| || || ||||| ||||| |||| Sbjct 17856 TTAAAAAGCATGAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAG 17915 Query 72446 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCC 72505 | |||||||| |||| | |||| |||||| || ||||| ||||| ||||| || || Sbjct 17916 CATGCGTAAAGTATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCAT 17975 Query 72506 ATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGT 72565 ||| || ||||| || ||||||||||||| |||||| || || | || || || || | Sbjct 17976 CTTGGTGAATTCCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTAT 18035 Query 72566 TATTTATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 72624 ||| | || ||| || ||| |||||| ||| || || |||||||| | ||| | Sbjct 18036 CATTGA-GGCGAAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTA 18094 Query 72625 AAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATC- 72683 |||||||| || |||| || | ||||| || | | | | || || |||| | || Sbjct 18095 AAGTCTCGATCATAAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCG 18154 Query 72684 --CATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 72741 ||| | | || || || ||||| |||||||||||| ||||| ||||| | | Sbjct 18155 TACATAGATTTGCT---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGG 18211 Query 72742 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACG 72801 | | ||| | |||| | ||| ||||||||||| ||||||||||| || || Sbjct 18212 TAGAGATCAGAGACAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACA 18271 Query 72802 GCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 ||||| | || || ||||| || || || ||||| Sbjct 18272 GCTATGCGTGCTGCAAGAATAGCGTAGTCGGGATG 18306 >seq388 Length=15577 Score = 183 bits (202), Expect = 4e-41 Identities = 586/914 (64%), Gaps = 64/914 (7%) Strand=Plus/Minus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 ||| ||||| ||||| || ||||| || |||||||||||||| |||||||| || | Sbjct 9267 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 9208 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880 ||| || |||||||||||||||||||| ||||| | || || || | ||| | ||| Sbjct 9207 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 9148 Query 41881 CAATTCAGAAATCAA-TCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939 || ||| || || |||||| | |||||| || || ||||||| | Sbjct 9147 TAACG-AGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 9089 Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999 |||| || | || ||| || || |||| |||||||||||||| || ||| | Sbjct 9088 TCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGG 9029 Query 42000 CGTCTGTTATAATA----GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTA 42055 | | ||| |||| | || | |||| || || ||| | |||||| | Sbjct 9028 CTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTC----AAATGTGAA 8973 Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 || | | ||| || || || ||| || || || || | ||| | |||||| ||| Sbjct 8972 AAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAA 8913 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || || || || | ||| | || || || || | |||||| || || ||||| || ||| Sbjct 8912 AAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCA 8853 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCACT 42234 || || ||||| || ||||| ||||| || | ||| | | |||| | || | || Sbjct 8852 CTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCT 8793 Query 42235 --GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------T 42285 ||| || ||||| ||||| || | ||| || || | |||||| | | Sbjct 8792 TTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAAT 8733 Query 42286 CGTT-----------------------------------------TCTATGGCATTAAAG 42304 |||| || || ||||| || Sbjct 8732 CGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAA 8673 Query 42305 AGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCT 42364 ||||| |||||| | |||||| | || |||||||| ||||| ||| |||| Sbjct 8672 AGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCA 8613 Query 42365 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGT 42424 || || || ||||| || || |||||||| || || |||| ||||| | || ||| Sbjct 8612 GAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGC 8553 Query 42425 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAA 42484 ||||| | | ||| || || | | ||||| || || || ||||| ||| |||||| Sbjct 8552 ACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAA 8493 Query 42485 AACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTAAT-TTATTCCAATCA 42541 || || | ||||| |||||| ||| ||| || | || | ||||||||||| Sbjct 8492 AAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCG 8433 Query 42542 TTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTA 42601 | |||||||||||| | ||| | || || | |||||||| ||||| || || ||||| Sbjct 8432 TGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTG 8373 Query 42602 TACATATTCCAGAT 42615 ||||||| ||| || Sbjct 8372 TACATATGCCATAT 8359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671085928326000