Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq649 120 2e-22 seq1181 104 2e-17 >seq649 Length=19467 Score = 120 bits (132), Expect = 2e-22 Identities = 138/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||||| ||||||||| || |||||||| ||||||||||| || ||| | || || Sbjct 4750 AACTAGATGAAGGGTAGATTCTTTTTGAATGTTGTAATCAGATAATGTTCGACCATCCTC 4809 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | |||||||||||| | || || | |||||| ||| |||||||||||| ||||| Sbjct 4810 AAGTTGTTTGCCAGCAAAGATTAATCTTTGTTGATCGGGTGGAATTCCTTCCTTGTCCTG 4869 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||||| || || ||| | || ||||| ||| ||||| || | |||||||||||| Sbjct 4870 TATTTTACTTTTCACATTATCAATGGTGTCGGATGACTCTACCTCAAGGGTAATGGTTTT 4929 Query 15334 ACCTGT 15339 ||| || Sbjct 4930 ACCAGT 4935 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 ||||| || || || || || |||||||||||||||||| | ||| | | | ||||| Sbjct 4238 ACTAAGTGGAGAGTCGATTCCTTTTGTATGTTGTAATCGTTAAGAGTACGTCCATCTTCA 4297 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||| || ||||| | ||||| | ||||||||| |||||| |||||||| || Sbjct 4298 AGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGGTGGAATACCTTCTTTATCTTGG 4357 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || || || || | ||||| ||||| | |||||| || | || || ||||| Sbjct 4358 ATCTTACTTTTGACGTTGTCTATTGTATCTGAAGATTCTACTTCAAGAGTTATTGTTTTC 4417 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || |||| ||||| ||||| || ||||| Sbjct 4418 CCAGTCAATGTTTTGACAAATATCTGCAT 4446 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | || | || ||||| ||||| ||||| ||||||||||| ||||| ||| Sbjct 5287 CCACCGCGTAAACGTAGGACTAAGTGAAGAGTGGATTCTTTTTGTATATTGTAGTCGGAA 5346 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || ||| | || || || || || |||||| | ||||| | |||||||| ||| Sbjct 5347 AGTGTTCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCTCTGTTGGTCTGGTGGG 5406 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||||||||| |||||| | || || ||||| ||| || Sbjct 5407 ATGCCTTCTTTGTCCTGAATTTTGCTTTTTACATTGTCGATAGTATCAGATGATTCGACT 5466 Query 15317 TCTAAGGTAATGGTTTTACCTGT 15339 || | ||| || ||||| || || Sbjct 5467 TCAAGGGTTATAGTTTTGCCAGT 5489 Score = 100 bits (110), Expect = 2e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 ||||||||||| ||||| ||||| || |||||||| || || | ||| | || || Sbjct 4466 ACTAAATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAAAGTTCGGCCATCCTCA 4525 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | |||||| || || |||| || || |||||||| |||||||||||||| || | Sbjct 4526 AGTTGTTTTCCTGCAAATATTAATCGCTGTTGGTCCGGAGGAATTCCTTCTTTATCTTGA 4585 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 |||||||| || || | || ||||| || | || || || | ||||| |||||| Sbjct 4586 ATTTTGCTTTTGACGTTATCAATGGTGTCAGAAGACTCGACTTCGAGAGTAATAGTTTTA 4645 Query 15335 CCTGT 15339 || || Sbjct 4646 CCGGT 4650 >seq1181 Length=24886 Score = 104 bits (114), Expect = 2e-17 Identities = 150/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCG--CGTCTTCTAAT 15217 |||||| || || |||||||| |||||||| || | ||| || |||| || | | Sbjct 11286 ATGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAG--ACAATGTCCGGCCGTCCTCGAGT 11229 Query 15218 TGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATT 15277 ||||| || || | ||||||||||||||||| |||||| ||||| || || ||| Sbjct 11228 TGTTTTCCCGCAAAAATCAAACGTTGTTGGTCAGGTGGAATGCCTTCCTTATCTTGGATT 11169 Query 15278 TTGCTCTTTACAATTTCTATGGTATCGCTATTT-TCTACATCTAAGGTAATGGTTTTACC 15336 || |||||| | || ||||| || | || || || || | ||||| |||||||| Sbjct 11168 TTTGATTTTACATTGTCGATGGTGTC-CGATGACTCCACCTCAAGCGTAATAGTTTTACC 11110 Query 15337 TGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || ||||| || ||||||||||| Sbjct 11109 CGTGAGGGTTTTCACGAAAATTTGCAT 11083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362151170725350