Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq388 118 9e-22 >seq388 Length=15577 Score = 118 bits (130), Expect = 9e-22 Identities = 202/288 (70%), Gaps = 5/288 (2%) Strand=Plus/Minus Query 13421 ATATAAGTATCTATCAATAAGCTA-TACATTTCTGAATGAATATTTTCCATCGCTATTTG 13479 || |||||||| || || |||| | || |||| || || |||||||||||| ||||| Sbjct 8645 ATGTAAGTATCGATTAA-AAGCGAATAAGTTTCAGAGTGGATATTTTCCATCATAATTTG 8587 Query 13480 GAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAA 13539 || |||||||| |||||||||| | | ||| ||||| | ||| | || | | Sbjct 8586 AAATCCATAAAAGAATCTAGCCTCAGGAATCTGCACTTCACTGCTAAACCGCTCGACGAG 8527 Query 13540 GTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttt 13599 |||||| ||||| |||||||| || |||||||| || || | || ||||| | Sbjct 8526 GTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAAAGGCTAGCACATGAGATATAAAGTA 8467 Query 13600 tttttCGTTTTC--TGACAACTTTA-ACCAATCTGGAAAATCTTTTGATAAATCTACCTC 13656 | ||| | || ||| | ||| |||||| | | |||||| || ||||| | ||| Sbjct 8466 TCGTTCATCATCATTGAGACGGTTATTCCAATCGTGGATATCTTTAGACAAATCAATCTC 8407 Query 13657 CTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATAT 13704 |||| | ||||||||||| || | || || || ||||| |||||| Sbjct 8406 CTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGTACATATGCCATAT 8359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430949046002700