Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq649 109 5e-19 seq1181 82.4 7e-11 >seq649 Length=19467 Score = 109 bits (120), Expect = 5e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 ||||||||| | ||||| | || | || || ||||||||||| | || ||| Sbjct 5211 ACTGGAAAAACCATCACTCTAGAGGTCGAGTCGTCTGACACCATCGACAATGTAAAAAGT 5152 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 || || ||||||||||| || |||||||||||||||||||| |||| | || ||| Sbjct 5151 AAAATACAAGACAAAGAAGGAATTCCTCCCGATCAACAAAGACTAATTTTTGCTGGAAAA 5092 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 ||||| || || | | ||| | ||||||||||| ||||||||||| || |||| Sbjct 5091 CAACTTGAGGACGGTCGAACACTTTCTGACTATAACATCCAAAAAGAATCGACACTCCAC 5032 Query 26973 CTGGTCCT 26980 ||||||| Sbjct 5031 TTGGTCCT 5024 Score = 104 bits (114), Expect = 2e-17 Identities = 138/189 (73%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 ||||| ||| | || ||| | || |||| ||| ||||||||| || | || ||| Sbjct 4935 ACTGGTAAAACCATTACCCTTGAGGTAGAGTCATCCGACACCATTGATAATGTGAAAAGT 4876 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 || || ||||| ||||| || || ||||||||||||||| | || | | |||||| Sbjct 4875 AAAATACAGGACAAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAAA 4816 Query 26913 CAACTCGAAGATGATAGAAACGTCAGC-GACTATAACATTCAAAAAGAATCTACTATCCA 26971 ||||| || |||| | ||| | | | | || || |||||||||||||||||||| | || Sbjct 4815 CAACTTGAGGATGGTCGAA-CATTATCTGATTACAACATTCAAAAAGAATCTACCCTTCA 4757 Query 26972 TCTGGTCCT 26980 ||| || || Sbjct 4756 TCTAGTTCT 4748 >seq1181 Length=24886 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| | || || ||| | || || | || | || ||| Sbjct 11083 ATGCAAATTTTCGTGAAAACCCTCACGGGTAAAACTATTACGCTTGAGGTGGAGTCATCG 11142 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| ||| || || || ||||| || || || || ||| Sbjct 11143 GACACCATCGACAATGTAAAATCAAAAATCCAAGATAAGGAAGGCATTCCACCTGACCAA 11202 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| | || ||||||||||| || | | | | ||||| ||| Sbjct 11203 CAACGTTTGATTTTTGCGGGAAAACAACTCGAGGACGGCCGGACATTGTCTGACTACAAC 11262 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996 || ||||||||||||||| | ||||| || || | ||| | |||||| Sbjct 11263 ATCCAAAAAGAATCTACTCTTCATCTCGTACTTCGTCTTCGTGGAGGA 11310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478624406172000