Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq649 98.7 9e-16 >seq649 Length=19467 Score = 98.7 bits (108), Expect = 9e-16 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||| ||| | |||||| | || || ||| | ||||||||| || | || ||| Sbjct 4935 ACTGGTAAAACCATTACCCTTGAGGTAGAGTCATCCGACACCATTGATAATGTGAAAAGT 4876 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 || || ||||| ||||| || || ||||||||||| ||| | || | | ||||| Sbjct 4875 AAAATACAGGACAAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAAA 4816 Query 24135 CAACTCGAAGATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAATTCA 24193 ||||| || |||| ||| | | | | ||||| |||||||||||||||||||| |||| Sbjct 4815 CAACTTGAGGATGGTCGAA-CATTATCTGATTACAACATTCAAAAAGAATCTACCCTTCA 4757 Query 24194 TTTAGT 24199 | |||| Sbjct 4756 TCTAGT 4751 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 24007 AAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAG 24066 ||| | | || || ||| | ||||| ||||||||||| | |||||||| || | | Sbjct 4658 AAATAGTTACCGGTAAAACTATTACTCTCGAAGTCGAGTCTTCTGACACCATTGATAACG 4599 Query 24067 TCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACG 24126 ||||| || ||| || |||||||| || ||||| || |||||| || | || | | Sbjct 4598 TCAAAAGCAAAATTCAAGATAAAGAAGGAATTCCTCCGGACCAACAGCGATTAATATTTG 4539 Query 24127 GCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCT 24185 || || ||||| || |||| | ||| | | | | || || ||||| || |||||||| Sbjct 4538 CAGGAAAACAACTTGAGGATGGCCGAA-CTTTATCAGACTACAACATCCAGAAAGAATCC 4480 Query 24186 ACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||| | | | |||||||| Sbjct 4479 ACTCTTCATTTAGTGCTTCGTCTAAGAGGAGG 4448 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||||||| | || || | || |||||| | ||||||||||| | || ||| Sbjct 5211 ACTGGAAAAACCATCACTCTAGAGGTCGAGTCGTCTGACACCATCGACAATGTAAAAAGT 5152 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 || || ||||||||||| || |||||||||||||| ||||| |||| | || || Sbjct 5151 AAAATACAAGACAAAGAAGGAATTCCTCCCGATCAACAAAGACTAATTTTTGCTGGAAAA 5092 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 ||||| || || | ||| | || |||||||| ||||||||||| ||| | || Sbjct 5091 CAACTTGAGGACGGTCGAACACTTTCTGACTATAACATCCAAAAAGAATCGACACTCCAC 5032 Query 24195 TTAGT 24199 || || Sbjct 5031 TTGGT 5027 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||| ||| | || ||| | |||||||| | || || ||||| | || ||| Sbjct 5489 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCTGATACTATCGACAATGTAAAAAGC 5430 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 || ||| |||||||||||||| || || || ||||||||| |||||| || || ||| Sbjct 5429 AAAATTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAAAG 5370 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 || | || |||| | ||| | ||| || || || ||||||||||| || |||| Sbjct 5369 CAGTTGGAGGATGGCCGAACACTTTCCGACTACAATATACAAAAAGAATCCACTCTTCAC 5310 Query 24195 TTAGT 24199 ||||| Sbjct 5309 TTAGT 5305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429902726984250