Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq649 96.9 3e-15 >seq649 Length=19467 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| |||||||| || | ||||| |||||||| |||||||||||| | Sbjct 4220 CCACCGCGAAGACGAAGCACTAAGTGGAGAGTCGATTCCTTTTGTATGTTGTAATCGTTA 4279 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || || ||||| || || |||| || | || |||||||| || Sbjct 4280 AGAGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGGTGGA 4339 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || ||| || |||| | || | ||||| | || || | Sbjct 4340 ATACCTTCTTTATCTTGGATCTTACTTTTGACGTTGTCTATTGTATCTGAAGATTCTACT 4399 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | || | ||||| || || | ||||| || || ||||||||| || Sbjct 4400 TCAAGAGTTATTGTTTTCCCAGTCAATGTTTTGACAAATATCTGCATGCCT 4450 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCTCATGGTGCGCG 131077 ||| ||||||||||| | || || || || || |||||||| || | | | | | || Sbjct 4459 ACGAAGCACTAAATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAAAGTTCGGCC 4518 Query 131078 AGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTT 131137 | ||||| || || || ||||| | ||||| ||||| ||||||||||| |||||||||| Sbjct 4519 A-TCCTCAAGTTGTTTTCCTGCAAATATTAATCGCTGTTGGTCCGGAGGAATTCCTTCTT 4577 Query 131138 TGTCGGTGATTTTCTGC--TTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGT 131195 | || ||| ||| ||| |||| | || | || || | ||||||| |||| || Sbjct 4578 TATC-TTGAATTT-TGCTTTTGACGTTATCAATGGTGTCAGAAGACTCGACTTCGAGAGT 4635 Query 131196 AACGGTTTTACCGGT 131210 || ||||||||||| Sbjct 4636 AATAGTTTTACCGGT 4650 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 ||||| || | ||| || |||| ||| | ||| || || ||||||||||||||||| | | Sbjct 4733 CCACCACGAAGACGGAGAACTAGATGAAGGGTAGATTCTTTTTGAATGTTGTAATCAGAT 4792 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || ||||| || || ||||| || ||||||| | || || || || || Sbjct 4793 AAT-GTTCGACCATCCTCAAGTTGTTTGCCAGCAAAGATTAATCTTTGTTGATCGGGTGG 4851 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||||| || | | || | || |||| ||||| | Sbjct 4852 AATTCCTTCCTTGTCCTGTATTTTACTTTTCACATTATCAATGGTGTCGGATGACTCTAC 4911 Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210 || | ||||| ||||||||| || Sbjct 4912 CTCAAGGGTAATGGTTTTACCAGT 4935 Score = 82.4 bits (90), Expect = 7e-11 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| ||||| || ||||| || | || || || ||||| || ||||| ||| Sbjct 5287 CCACCGCGTAAACGTAGGACTAAGTGAAGAGTGGATTCTTTTTGTATATTGTAGTCGGAA 5346 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| | |||||| || ||| | || || | ||| ||||| || ||| Sbjct 5347 AGTGTTCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCTCTGTTGGTCTGGTGGG 5406 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 || ||||||||||| ||| ||| ||||| Sbjct 5407 ATGCCTTCTTTGTC-CTGAATTT-TGCTT 5433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471975333984000