Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq649 91.5 1e-13 >seq649 Length=19467 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/156 (74%), Gaps = 4/156 (3%) Strand=Plus/Minus Query 111262 GTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTAT 111321 |||||| ||||| ||||||||||| |||| |||||||||||| || |||| | Sbjct 5160 GTAAAAAGTAAAATACAAGACAAAGAAGGAATTCCTCCCGATCAACAAAGACTAATTTTT 5101 Query 111322 GCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATAATATACAAAAAGAAT 111379 || || |||||| | || || || || ||| | | || ||||| || |||||||||| Sbjct 5100 GCTGGAAAACAACTTGAGGACGGTCGAACACTTT--CTGACTATAACATCCAAAAAGAAT 5043 Query 111380 CTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 | ||||| || || || | ||||| || ||||||| Sbjct 5042 CGACACTCCACTTGGTCCTTCGTCTTCGTGGTGGCA 5007 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 111280 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111339 ||||| ||||| |||| |||||||||||| | || | ||| ||||||||| | || Sbjct 4866 GACAAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAAACAACTTGAG 4807 Query 111340 GAT--TCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGT 111397 ||| || || | ||| | ||||| || || |||||||||||||| || ||| |||| Sbjct 4806 GATGGTCGAACATTAT--CTGATTACAACATTCAAAAAGAATCTACCCTTCATCTAGTTC 4749 Query 111398 TGCGTCTGCGCGGTGG 111413 | ||||| || ||||| Sbjct 4748 TCCGTCTTCGTGGTGG 4733 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 111211 ACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAA 111270 || |||||||| || ||| | ||| ||| | ||| || | | | | |||||| Sbjct 5489 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCTGATACTATCGACAATGTAAAAAGC 5430 Query 111271 AAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAA 111330 |||||| |||||||||||| | || || ||||| || | |||| || || || Sbjct 5429 AAAATTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAAAG 5370 Query 111331 CAATTGGAAGATT--CTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTAC 111388 || ||||| ||| | || ||| | |||| || ||||||||||||||||| || || | Sbjct 5369 CAGTTGGAGGATGGCCGAACACTTT--CCGACTACAATATACAAAAAGAATCCACTCTTC 5312 Query 111389 ATTTAGTGTTGCGTCTGCGCGGTGG 111413 | ||||| | ||| | |||||||| Sbjct 5311 ACTTAGTCCTACGTTTACGCGGTGG 5287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423007260670000